Gene Tpen_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0019 
Symbol 
ID4600522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp15929 
End bp16618 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID639772772 
Producthypothetical protein 
Protein accessionYP_919432 
Protein GI119718937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.857694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGACG GTGAGAGGAG GCCTTCGAAG TTCGTTTCCA GTAGGAGGAT AAGGGCGTTT 
TTCACCAGGG AGGGTGACGT CCTCTACCTC GACCTCGACG GGGAGACGTA CAGCGGGGTC 
GGCGACTTCG TACCCATACC TGTAGGCAAG CTTCGGGGGT TAAGGCTGGA GGAGATCCCC 
GAAGGCGTGT CGATAGAGCC CGTAGAGTAC ATGGAGAAAA ACATCTTCTA CATCCTGAGG 
ATGGGCTCTC TCTTCACATA CGAGGTTAAA GTTAACAGGG GAGGAGTCGA GGTAAGCGTT 
GACGAGTGGT TCTCCGAGTG GAGGTCGTAC ATAGGGATAG AGGCGTACCA GGAGGCTCTT 
CTCTCCGTGT TAAAGGAGCT CATGGACTCT GGCTTCGTTA GCTACGTGGA TTTGGAGAGC 
GGAGAGGAGA TGCTCTACGT CTCTTTTGTT GTGCCGCTCC CCGGGAGCTT GACGGTGTTC 
AAGGCTTTGA AGGTCGTAAG GCGGCTGGTG AGAGAGCTCG AGCTAGAGGT TACTCGCCGC 
GCTAGTATAC TGGCGCTGAG GGAGGCTAAG AGGAAGCTGA GGAGGATAGC GGAGAGAGGC 
TTGGAGGAGA GTTTTCTCGA GAGGGTTAGC AGGATTTTTT ACAGCGGTGT AGGCGGAGGG 
GAGGAAGGAA TTTCCAAAAA ATCGAAATAG
 
Protein sequence
MGDGERRPSK FVSSRRIRAF FTREGDVLYL DLDGETYSGV GDFVPIPVGK LRGLRLEEIP 
EGVSIEPVEY MEKNIFYILR MGSLFTYEVK VNRGGVEVSV DEWFSEWRSY IGIEAYQEAL 
LSVLKELMDS GFVSYVDLES GEEMLYVSFV VPLPGSLTVF KALKVVRRLV RELELEVTRR 
ASILALREAK RKLRRIAERG LEESFLERVS RIFYSGVGGG EEGISKKSK