| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0004 |
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| Symbol | |
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| ID | 4601889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 3025 |
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| End bp | 4311 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639772757 |
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| Product | major facilitator transporter |
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| Protein accession | YP_919417 |
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| Protein GI | 119718922 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.44219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGAGG GAAGACCCAG GGTTAAAGTC ATAGTAGCCT CCCTAGCGCT CTTCGTGCTC
TTCTACTTCA TGGGGTACTA CATGCTTAAC CCGATACTGC GAACGTTGCA CGCAGAGGGG
CTCATTCCCG GGAAAAGCGA GGTCGAGTGG CGCTTCAACG CCGGGCTTAT AGCCACGCTA
CTTCAAGGAA CGGGCCTCGT CCTCTCGTTC GTGTGGGGAG TGCTCGCCGA CAAGGTTGGT
AGGCGCCCAG TGATTTTCAC GCTTGGAGTA ATAATGGGGT TAGGGCTACT CCTGGTGTCG
CAGGCTAGGA GCTACGCCGA GCTACTCGCC TACTTCATCG CGTTCGGCGT GGGATACGTG
GGCGTGGGAC CAGCGATATA CGCCTTTATC TCCGACGCCC TGCCCAGCGA GAGCAGGGGG
AGAGGTTACG CGTCCTACTA CGTCTCAAGC GTGCTCGCCA TGATCCTAGG GCTGATAGTC
GCCGGCGTAC TCCTGCCGTG GCGCACAGCC TACATGCTTG CAGGACTACT CACACTGGTG
TTCTCCGTCC TCCTGTTCTA CTCTTCGAGG GGCATATTCA TAGGGTACTC GGAGAAAGGC
GCTAGAGAGG CTAGGAGGTA CTCGCTCAGA GAATCCCTGC CGAGCCTGAG GAAGAAAAGC
GTTCTGCTCG TACTCCTAAT GATCATACCC TGGACCATCC CTTGGGGTAT GCTGAGCATA
TGGTCCATAG ACTACATTAG CACGAAGTGG GGCGTCTCGA CTGGTACAGC GTCGCTGATA
ATAGCGGCGG CGACTGCTTC GATAGCTCTT GGACACATAG TGGGCGGCAC CCTGAGCGAT
AGGCTCGCCG GCAAGGGGGA CTACACCGGG AGAACAAAGG TGTCGCTACT GGGAGTAGTA
GTCGGGTACG TGTCGATGAT GCTCATGGTA ACATACCCCT ACCCCTACGG CAGTACGAAC
TTTAAAGACC TCCTTGTACC CTCAGCGCTA GCAGTTGGCG GAATGATGTT CACCACGTTT
GCGTACCCGA ATATAAACAC CGTTCTAAGC GAGGTGGTAG TCCCGGAGCA TAGAGGCACG
GTGTTCGCTG TTTACAGCGT TCTAAACAAC CTGGGCTGGA CCCTGGGCCC AACGGTCTAC
ACTCTTCTCC TCAAGGCATT CAGCGGCGTC TACGCAGACC AAGTATCGGC GATGACCGCG
GCAGCGTCGA CGATAGTCTC CCTGTGGCTC ATACCTGCAC TTTGCTGGCT ACTGCTCCAC
AGGGTCTACC CGAAGGAGAA GATATAG
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| Protein sequence | MPEGRPRVKV IVASLALFVL FYFMGYYMLN PILRTLHAEG LIPGKSEVEW RFNAGLIATL
LQGTGLVLSF VWGVLADKVG RRPVIFTLGV IMGLGLLLVS QARSYAELLA YFIAFGVGYV
GVGPAIYAFI SDALPSESRG RGYASYYVSS VLAMILGLIV AGVLLPWRTA YMLAGLLTLV
FSVLLFYSSR GIFIGYSEKG AREARRYSLR ESLPSLRKKS VLLVLLMIIP WTIPWGMLSI
WSIDYISTKW GVSTGTASLI IAAATASIAL GHIVGGTLSD RLAGKGDYTG RTKVSLLGVV
VGYVSMMLMV TYPYPYGSTN FKDLLVPSAL AVGGMMFTTF AYPNINTVLS EVVVPEHRGT
VFAVYSVLNN LGWTLGPTVY TLLLKAFSGV YADQVSAMTA AASTIVSLWL IPALCWLLLH
RVYPKEKI
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