Gene Tpen_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0001 
Symbol 
ID4602200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp30 
End bp881 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID639772754 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_919414 
Protein GI119718919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGGA GTAAGCTTGA CTACCTTTTC GCGGCGGTAT CAGTCTTGCT ACTTGTCTCC 
CCGCTGATCG CCTACCTGAC TGGTAACTGG GTCGGCTTCT GGCGGCTTGC CACGAACCTG
GGCGACGAAC CCGCCTACGT GGCTCTAGCC GTTGTGCTGT ACTTCCTCGT CGACCAGGGC
TTGGGGTTCT CGGTTTTACT AGCGCTCTCC ACGACTGCTT GGTTGAACGT CGTAGTGAAG
AATACCCTTC GGCTCCCCCG CCCCCCGAGG GAGCTGTGGC TTGCGAACGC AGAGGGGTAC
GGTTTTCCGA GTGGGCACTC GCAGACATCC ACCACTTTTT GGTCCAGCCT CTCGCTTAAA
ACGCGGAGGC TCGGAGTAGT GGTTCTGGGT GTAGCGGTCG TAGCGATAGT CGGTGCCTCC
AGGATAATGC TGAACGTGCA CTATCCCTGG GACGTTGCCG GCGGCATTGC GCTGGGACTC
GCTGTGTCTT ACGCCTCGTA CTACCTCTTC GACAGGCTAC CGGGGAAGGC TTCTCTATCC
TCCGCTGTTC TGGCGGTTTA CGGGCTCGCG GTGGGGGGCC TCTACCTGGT AGTCGCGGAC
GCGACGATCG CTAGGATAGG GGGGCTGATA GTAGGCCTCT CCGTATACCC GCTGGTAAGC
GAGAAGGTGA GCCTAGCCGG CAAGCCTCTC GCGTGGAGGG CGGTGCTCGC TGCGGTAGCC
CTCGTGGTCG CCATGCTTCT AACGACGGTT GCTAAGGCGC AACCAGTCCC GGTACAGTTC
ATCGCCTACC TGGCTACGGG GGCTACAGTT GTAAGTCTAC CGCTTCTACT GAAAAGAGCA
GAAAAAGCTT AG
 
Protein sequence
MARSKLDYLF AAVSVLLLVS PLIAYLTGNW VGFWRLATNL GDEPAYVALA VVLYFLVDQG 
LGFSVLLALS TTAWLNVVVK NTLRLPRPPR ELWLANAEGY GFPSGHSQTS TTFWSSLSLK
TRRLGVVVLG VAVVAIVGAS RIMLNVHYPW DVAGGIALGL AVSYASYYLF DRLPGKASLS
SAVLAVYGLA VGGLYLVVAD ATIARIGGLI VGLSVYPLVS EKVSLAGKPL AWRAVLAAVA
LVVAMLLTTV AKAQPVPVQF IAYLATGATV VSLPLLLKRA EKA