| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4896 |
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| Symbol | |
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| ID | 4595275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 228473 |
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| End bp | 229120 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772681 |
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| Product | response regulator receiver |
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| Protein accession | YP_919341 |
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| Protein GI | 119714199 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.446448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.220667 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTCC TCCGCGTGGT TGTCGTCGAC GACCAGCCCC TGGTTCGAGC AGGTCTGGCC
CGGATCATCG AGGCGGACCC GAGCATCGAG CTCGTCGGCG AGGCCGGGGA CGGGCAGACT
GCGATGGCGC TGGTACTCAG GCTTGAGCCA GAAATCGTCC TGATGGATGT CCGGATGCCC
CTCCTCGACG GGATCGCCGC GACGCGGAAG CTCCACGAGG CGCAGAGCTC AGCGCGCATC
ATCGTGCTCA CCACGTTCGG GCTCGACGAC TACGTCATCG GCGCCCTGAG AGCCGGAGCG
CATGGGTTCG TGCTCAAGGA CGCGCCGCCC GAGCGGCTGT TGGAGGCCAT CCACGAGGTC
GGCGCCGGGC GAGGAGTCAT CGACCCAGCA GTCACACTCC CGGTGATCAG GGCGCTGGGC
ACCAGAGAAC TGCGCCCCGA GGTCGCCGCC CGACTGGCCG ACCTGACCAG CAGGGAGCGC
GACGTGCTGG TTCTTCTCGC GCAGGGGCAC TCGAACGCCG AGATCGCCGC GAGACTCGTC
GTGGGTGAAG GGACTGTGAA GACCCACGTC GCGCACGTGC TGGCCAAGCT CGGGGTCCGC
GACCGGCTCC AAGCCGTCGT CTCGGCGTTC AACGCCGGCG TCGTCTGA
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| Protein sequence | MSVLRVVVVD DQPLVRAGLA RIIEADPSIE LVGEAGDGQT AMALVLRLEP EIVLMDVRMP
LLDGIAATRK LHEAQSSARI IVLTTFGLDD YVIGALRAGA HGFVLKDAPP ERLLEAIHEV
GAGRGVIDPA VTLPVIRALG TRELRPEVAA RLADLTSRER DVLVLLAQGH SNAEIAARLV
VGEGTVKTHV AHVLAKLGVR DRLQAVVSAF NAGVV
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