| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4792 |
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| Symbol | |
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| ID | 4595399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 109873 |
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| End bp | 111108 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772579 |
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| Product | phage integrase family protein |
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| Protein accession | YP_919239 |
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| Protein GI | 119714097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGCGTG ATCTCGAACA ACTGCAGATT GAGCGCTTGG GTTGCGTTCG CTCCGGTGGC
TCCGGTGTTG CCTGGCTGGT CTACGACGAC GCGGGCGATG CGGTTCGCCC GATCGCGGAG
TTCCTCCGGG ACTTCGCAGC GCGGGGCAAT AGTCGGGGCA GCGTGCGGTC CTATGCCTAT
GGGCTGCTTC GGTGGTGGCG CTGGCTCGCG GCGGTCGGCG TGGAGTGGGA CCGAGCCACC
CAAGCAGAAG TACGTGACCT GACATTGTGG CTGCAGTTGC ATCCTAAGCC GCGCCGGTCA
CAGCGGACCG TCTCAGCAGC GACAGCCGGG ACGGTGAACC AGGTGACCGG CAAGCGCTAC
CTGGACGACC ACTACGCGGC ACGTACGATC CGGCACAGCA ACGCGGTGGT CTCCTCGTTC
TACGAGTTCT GGGGCGAGCA GGGGTTGGGT CCGGTGGTGA ACCCGGTGGC GCGCGACCAT
CGCGGCCAGG GACGTTCGAA CGCGCATCAC AACCCGATGG AGCGGTTCCG TCCCGAGGGT
CGGGTCCGGC ACAACCCGAA GGTCCCGCGG CGTCAGCCGC GGGCGCTGCC GGACCAAGCC
TGGGCAAATC TGTTCGACGC GATGGGCTCG AACCGGGACC GTGCGCTGCT GGCGTTGGCA
ATCAGCAACG GCGCCCGCGC GGCGGAGGTC CTCGGCCTGC GCGGCTGCGA CGTGGACTGG
GGCAACCAGC AGGTCCGGGT GATCCGCAAG GGCAGCCGTG CCGAGCAGTG GCTGCCGGGC
AGCAACGACG CGTTCGTGTG GCTGCGGCTC TATCTGGCCG AGATCGGTGG CGTCGGCCCG
GCTGACCCGC TGTGGGTGAC GCTGCGCAGA CGACGTGACG CCGACGGCAA GTTGGCCCGG
ATCCCGTTGA GCTACGAGGC GCTTCGGGCG GTGCTGCGCC GCGCAAACGC GAAGCTGGGC
ACCAACTGGA GCATGCACGA CCTGCGCCAC ACCTGCGCGT TGCGGATGGC CGCCGACGAG
CACGTCTCGC TGCGCGACGT CCAGACGATC CTGGGCCATG CCCACCTGGA AACGACCGCG
GAGATCTATC TCGTCGAGGA CGAGCGCCAC ACCGTGGAGC GGGTCGCCGA ACACCTGGCC
CGTCTGGCCA AGCCGAAGCC AGCCCCGGAG CCTGTCGACC GCGGCTACCG GGCCGCCGAC
CTGGCGGTGC TGTTCGGTGA CGGGGTACTG CCTTGA
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| Protein sequence | MSRDLEQLQI ERLGCVRSGG SGVAWLVYDD AGDAVRPIAE FLRDFAARGN SRGSVRSYAY
GLLRWWRWLA AVGVEWDRAT QAEVRDLTLW LQLHPKPRRS QRTVSAATAG TVNQVTGKRY
LDDHYAARTI RHSNAVVSSF YEFWGEQGLG PVVNPVARDH RGQGRSNAHH NPMERFRPEG
RVRHNPKVPR RQPRALPDQA WANLFDAMGS NRDRALLALA ISNGARAAEV LGLRGCDVDW
GNQQVRVIRK GSRAEQWLPG SNDAFVWLRL YLAEIGGVGP ADPLWVTLRR RRDADGKLAR
IPLSYEALRA VLRRANAKLG TNWSMHDLRH TCALRMAADE HVSLRDVQTI LGHAHLETTA
EIYLVEDERH TVERVAEHLA RLAKPKPAPE PVDRGYRAAD LAVLFGDGVL P
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