Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4712 |
Symbol | |
ID | 4595348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 11586 |
End bp | 13151 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772501 |
Product | hypothetical protein |
Protein accession | YP_919161 |
Protein GI | 119714019 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.188886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGTCT ACGGAGCATC CGCAACCCGA GACCGGCAGG CCTGGCTCTT CGGGCTCACC GGCCCCCAGT TCTTCATGGT GCTGGCCGCC GGGTTCCCGA CCTGGATGGC GATCGCCATC GGGCAGTGGC TCGCACTGCT CGGCCTCGTC CCGATGTGGG GCGTAGTTGC GCTACTGATC TGCCTACCGA TCCGAGGCCA CTCGGCCTTC CAGTGGATCG GCGTCCTGTT CCGGCACCTG GCCGGGGCAG CGTTTGGCTG GTCCCGGTTC CAGTCCAAGG CCGCCGCCGG CGACCTCGAC CTCGGCGACG CAGACGACGA TGAGGACGAC GGCGACGCAG ACGACGATGA GGACGACGGC GACGCGGGCG AGGCGGACCT GCCCGGCATC CTGTCCAGCA TCCAGATCCA CGACGGCCCG CCGATGACCG GGCAGACCGC ACGCCCGGCG ATCATCCAGA ACCACGCAAC CCGCACGTGG GCAGCCACCG CGCGGGTCGT CCACCCCGGC ATCGGGATGA GCGACGACGC AGACCGGTTC CGCATGGGCG CCGGCCTCAC CGAGATGATG GAGGCCGCGA CCGCCGGCAA CCAGATCGAC CTGATCGTGG TTCAGGTCCG CACCATCCCC GACGACGGCA CCGAGCGCGA CGAGTGGGTA CGTCACAACG CGCGCCCCGA CGAGCCCGAG GTCTCGGCCC GGGTCAACAC CCAGCTGGAG TCGATGACCG CCGGCGCGGC CGTGCGCCGC GAGGCGTTCG TGACCGTGGT GGTTCGTGAG GACGTCATCA ACAAGGACGC CAAGCGCGCA GGGCGAGGCG TGACGGGTCG CGCGCGCATC CTGTACTCGG TGCTGGCCGA GGTGGAGGCC CGGCTGACCG GCTCGATCGG CTGCACGCGG GTGAACTGGC TCGACAGCTC CGAGCTCGCC GTGGCGATCC GAACCGGGTT CGAGCCCGGC GATGCGCCGG CGCTCGCGGA CGCCGCGATC CACCACCGCG AAGACCCGTC GATCGCGGCC GGTATCCCGG TCGCGGCCGC GGGTCCGACC AATGCGTCGA CCGCACTGCG GTCCTACAGG CACGGGGAGT GGGAGTCCAT CTCCTCCACG ATCCTGCTGC CACGCAAGGG TGCCCGGATG GGTGCGCTGG CGCGGGTGCT GGTGCCGTCC CAGCCGGGCG AGCGGCGCGC GCTGACGGTG TTCTACCGGC CCGTCTCGCA GCAGTCCGCG GACCGGGCCA CCGGACGGGC ACAGATGTCG GCGGTGATGG CCGGCACGCT GCGTGAGAAG GCCGGCAAGG TTGAGCGGGC CAAGGACCGC CAGTCGGTCG GCAAGCTGCA CGACCGCGAC GAGAAGCTCG AGATGGGTCG CTCGCTGGTC AAGGTGTCCT CGGCGATCTC GGTCACGGTT CCGGCCGGGT GGAACGTTCA GGACTTCGGC CGTCGTCTCG ACGCCTCGAT CCGCATCAGC GGCTTCACCC CGCTCCCTCT GGACGGGGCA CACGACGCGG CCTTCGCCGT GTCTGCGATC CCGCTGGGGG CAGGCCTGCC GAAGAAGCGC CGCTAA
|
Protein sequence | MSVYGASATR DRQAWLFGLT GPQFFMVLAA GFPTWMAIAI GQWLALLGLV PMWGVVALLI CLPIRGHSAF QWIGVLFRHL AGAAFGWSRF QSKAAAGDLD LGDADDDEDD GDADDDEDDG DAGEADLPGI LSSIQIHDGP PMTGQTARPA IIQNHATRTW AATARVVHPG IGMSDDADRF RMGAGLTEMM EAATAGNQID LIVVQVRTIP DDGTERDEWV RHNARPDEPE VSARVNTQLE SMTAGAAVRR EAFVTVVVRE DVINKDAKRA GRGVTGRARI LYSVLAEVEA RLTGSIGCTR VNWLDSSELA VAIRTGFEPG DAPALADAAI HHREDPSIAA GIPVAAAGPT NASTALRSYR HGEWESISST ILLPRKGARM GALARVLVPS QPGERRALTV FYRPVSQQSA DRATGRAQMS AVMAGTLREK AGKVERAKDR QSVGKLHDRD EKLEMGRSLV KVSSAISVTV PAGWNVQDFG RRLDASIRIS GFTPLPLDGA HDAAFAVSAI PLGAGLPKKR R
|
| |