| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1891 |
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| Symbol | |
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| ID | 4600305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008696 |
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| Strand | - |
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| Start bp | 30662 |
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| End bp | 31498 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639772489 |
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| Product | phage integrase family protein |
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| Protein accession | YP_919149 |
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| Protein GI | 119709809 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGAGG CGGTGGCAAA GCCGGAGGAC ATCAGGGCGC TGGTGGAGAA CTATCTGGGA
GTAGTCAAGG CGCTTAGGAG CCACAACACG TACAAGACCT ACGCGAGCGT GCTGTTCGCG
TACGCCAAGT TCGTAGAGGA TACGGGTAAG CCTGACCCAG CCGCGTTCAT CTCGTGGCTC
GAAAAGAACG GCTGGGAAAA GAGGACTAGC ATCAGAACCG CGTACGTCGT GCTCAGGGGC
TTCCACAAGT TCGCCGGTCT GCCTTGGACT CTGCCACCGG TTAAGAAGCC CGAGTCCGTC
CCCAAAGCAC TGGGAACCGA GGACGTCAGG AAGCTGTTGT CAGTGGCTAG CCCAGCCGAG
CGCGAGGTCA TAGTATTCCT GTTGAAGACG GGGCTGAGGG TAAGCGAGTT CGTGCACAGC
AGGTGCGAGG ACGTGCTGGT GGTGGGCGAT GGCAGGTACA TGCTGAGGGT CAGGGGCAAA
GGTGACAAGG TCAGGCTTGT ACCGCTGACG AAGGACGTAG TCGAGATTAT CAAGGCGAGG
TGCACGGGTA GGGCTGGCTA CATCTTTCCC AGCCCGTTAG ACCCCGATAA GCCGGTAAGC
GCTAGGAGCA TACAGCACTT GGTCTCAAGG GTGGCTAGGC GCGCGGGTCT TCAACGCGTG
ACTCCCCACA CGCTGAGGCA CACCTACGCT ACTCTCCTGT TGAACAACGG GGTTGACATC
AGGACGATTC AGACGCTACT GGGTCATGCT CAGCTAACAA CGACTCAAGT ATATACAAAG
GTCGATGTAG CGAGAATGGT GGACGCCATA GACTCTGCCC TGACGATAAA GCTGTAG
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| Protein sequence | MQEAVAKPED IRALVENYLG VVKALRSHNT YKTYASVLFA YAKFVEDTGK PDPAAFISWL
EKNGWEKRTS IRTAYVVLRG FHKFAGLPWT LPPVKKPESV PKALGTEDVR KLLSVASPAE
REVIVFLLKT GLRVSEFVHS RCEDVLVVGD GRYMLRVRGK GDKVRLVPLT KDVVEIIKAR
CTGRAGYIFP SPLDPDKPVS ARSIQHLVSR VARRAGLQRV TPHTLRHTYA TLLLNNGVDI
RTIQTLLGHA QLTTTQVYTK VDVARMVDAI DSALTIKL
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