Gene Pden_5134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5134 
Symbol 
ID4583695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp652635 
End bp653789 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content70% 
IMG OID639772437 
Producthypothetical protein 
Protein accessionYP_918890 
Protein GI119387856 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0254476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.895353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCA AGACCCGGAC GAGATGGCGC ATGGCGCTGC CCGCTTTGAT GGCACTGGCC 
CTGGCCATGC CCGCCGCCGC GCAGGATGCG CCGACCGAAC CCGCGGCCCT GACGGCGGCC
CAGTTCGCCC CCGCGGTGAT CCGCACCGAC AGCATCGCCG GCGCCTATGA GGTGGTGCAT
TGGGCCGAGG CGGGGCTGGT CTTCGTCGCC TCGGTGCCCT CCTTCGACAA GGGCTCGGCG
GGCTTCATCC ATGTGCTGGA CGCGAACGAC CTGCGCCCGA TCCGCCGGAT CCAGCTGCCG
CGCCGGCCCT TCGCGCTGGC GCTGGATCGC AGCGCGGGGC GGCTCTATGC CGGCAATACG
CTGGACGGCT CGCTGACCGT GATCGATGCG CGGGGCGGGC AGATCCTCGA CACCATCCAG
CTCGGCCAGC CCGAGGGCGA GGGCTTCGAG CATACCCGCA TGATCGTGCT GGACGAGGAA
AAGGGCCTCG CCTTCGTGAC CAGCCCCGGC CGCAAGGGCG TGACCTGGAT CGTCGACACC
AGGGCGGGCG AGTTGCTGCA CCGGATCGAG GGCGGGCTCT GGACCGCCGG GGCGGCCTAT
GACGCCGGGG CAGGGCGCTT CTATGCCGGC GGCGGCGGCA TCGAGGAGAT CGCGGTGATC
GACGCCGCCA GTGGCGAGCG GGTCGGTGCG ATCTCGACCG GCGACACGAC CGAAGAGGGC
GAGGACGCCT CGCAGCATTT CTTCGTCAAT CTGGCGATCG ATGCCGAAGG CCAGCGCCTG
TTCGCGGCCG ATGCCGACAA GGGCGCGCTC TACGTCTTCG ACATCGCCAG CGGCAAGGTT
GCCGCGCAGG TTCCGGTCGG CCCCGGTACG CTGGATGTGG CCTACAACCC GGCGCGGTCC
GAGATCTATG CCACCTGGCG CGGGGAAAAG GCCGGCACCG GCGGGTTGGC GGTAATCGAT
GCGGGGGACT ATGCGGTCAA GCAGCGCCTG TCCCTGCCGA CGAATCCCAA CAGCCTTGAG
GTCGGCGAGG ACGGCCGGAC GCTGTTCGTG ACGGTGAAGG CGCCGCATGA CAAGGAGCAT
CCCGATTATC GCGAGGGCGC GATGGATTCG GTGATCCGGG TTGACCTGGA GCGGTTGGGC
GAGGGCGGAG AATAG
 
Protein sequence
MTPKTRTRWR MALPALMALA LAMPAAAQDA PTEPAALTAA QFAPAVIRTD SIAGAYEVVH 
WAEAGLVFVA SVPSFDKGSA GFIHVLDAND LRPIRRIQLP RRPFALALDR SAGRLYAGNT
LDGSLTVIDA RGGQILDTIQ LGQPEGEGFE HTRMIVLDEE KGLAFVTSPG RKGVTWIVDT
RAGELLHRIE GGLWTAGAAY DAGAGRFYAG GGGIEEIAVI DAASGERVGA ISTGDTTEEG
EDASQHFFVN LAIDAEGQRL FAADADKGAL YVFDIASGKV AAQVPVGPGT LDVAYNPARS
EIYATWRGEK AGTGGLAVID AGDYAVKQRL SLPTNPNSLE VGEDGRTLFV TVKAPHDKEH
PDYREGAMDS VIRVDLERLG EGGE