Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5132 |
Symbol | |
ID | 4583693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 649292 |
End bp | 650629 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772435 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_918888 |
Protein GI | 119387854 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGCG CTCCCGGACC CTTGCAAAGC CAGATCACGG TATTCTTTGC GGGGAGTTCC CAGGCTTGCA TCATTGCCGT CGACGCGCTT CCGCCGGATC GCATCTCCTT GTCTTCAAAT CCGGGCATCG AATGGACCTC GTGCATGAAC GCGCTCTTGC AGTCCGAGAC TGACCTGCCG CCGCCGCTGG CGATGCCCGT GCAGGGGCCG GCCCGCCAGG GGCGCCGTGC CCTGCTTGCA GGGCTGGTGC TGGCTGCCCT GGCGGGGGGC GCGGGCTGGT GGCTCTGGTC CTCGCCGCCT GCCGTTCACT ACGACACCGC GCCGGTGATC CGCCGCGACC TGGAGAACGC CGTGACTGCC AGCGGCCGGA TCGAGCCGGG CGCCTATGTC GATGTCGGTG CGCAGGTTTC GGGTCAGTTG CGCCGGCTGC ATGTGGCCGC CGGAGACCGG GTCGAGGCCG GGCAGTTGCT GGCCGAGATC GACGCCGAGG TGCAGGCGGC GCAGGTCGAG GGATTGCAGG CCGAACTGGC CCGGCTGGCC GCCGAGCGCA GCGAATTGCA GGCCCAGCTT GCCTTTGCCG AACGGCAGGC GGGGCGGCAT TCCTCGCTGG CCGGGCGCGC CAGCAGCCGC GTCACGCTGG AAGAGGCCGA GCGCGACCGC GACGTGCTGC GCGCGCGGAT CGAGGCGCTC GACGCCACCA TCCGCCGCAG CCGCGCCGCG CTGCGCGCCG AGGAAGCGAC GCTGGCGCGC TCGCGCATCA CCTCGCCCAT GGCCGGCACC GTGGTCGCCG TAGAAGCCCG CGAGGGCCAG ACGCTGAATG CCAATTACGA CACCCCGGTG ATCCTGCGCA TCGCCGACCT CGCCACCATG ACCGTGCGCA GCGACGTCTC CGAGGCCGAC GTGGTCCATC TGCGGCCCGG AATGCCGGTC TGGTTCACCA CGCTGGGCTT TCCCGACCGC CGGCATCGCG CGACGCTGCG GCAGGTGTTG CCCGCCCCGC CGGTCAAGGA GGAGGAAGGC GCCAGTTCGG TCGTCACTTA TGTCGCGCTG TTCGACATTG CCAATGCGGG GGGCGAGTTG CTTTCGGGCA TGACCGCGCA GGTGTTCTTC GTCACCGAAA GCGCGGCCGA CGTGCTGGCC GTTCCCGTTT CCGCGCTGGA CGACGACGGC AGCCTGCGCG TCCAGACCCC CGGCGGCGCG CTGGAAACCC GCCATCCCGC AACCGGGATG CGCACCCGAG CCCATGCCGC GATCCTTTCG GGATTGGCTG AGGGCGAACA TGTCGTCACC GGCGAGCGCC CCGCCGAAGG CGAGCCGCTG CTGAGGATCG CGCCGTGA
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Protein sequence | MRRAPGPLQS QITVFFAGSS QACIIAVDAL PPDRISLSSN PGIEWTSCMN ALLQSETDLP PPLAMPVQGP ARQGRRALLA GLVLAALAGG AGWWLWSSPP AVHYDTAPVI RRDLENAVTA SGRIEPGAYV DVGAQVSGQL RRLHVAAGDR VEAGQLLAEI DAEVQAAQVE GLQAELARLA AERSELQAQL AFAERQAGRH SSLAGRASSR VTLEEAERDR DVLRARIEAL DATIRRSRAA LRAEEATLAR SRITSPMAGT VVAVEAREGQ TLNANYDTPV ILRIADLATM TVRSDVSEAD VVHLRPGMPV WFTTLGFPDR RHRATLRQVL PAPPVKEEEG ASSVVTYVAL FDIANAGGEL LSGMTAQVFF VTESAADVLA VPVSALDDDG SLRVQTPGGA LETRHPATGM RTRAHAAILS GLAEGEHVVT GERPAEGEPL LRIAP
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