Gene Pden_5128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5128 
Symbol 
ID4583689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp644002 
End bp644772 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID639772431 
ProductABC transporter related 
Protein accessionYP_918884 
Protein GI119387850 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.012319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCC ACCAGTCCCT TCTGCGCGGA GAGGTCAGGG TGCGCGGCCT TTCCAAGTCC 
TATTCGCTGA ATCGCAACGC GCTTTCGGTC CTGCGCGATC TGGATCTGGA CGTGAACGGC
GGCGAGATCC TGGCCATCGT CGGTCCTTCG GGCTGCGGCA AGACCACGCT GCTGCGGATT
CTGGCGGGGC TCGAAACCCC CGATCGCGGC AAGGTGCTGA TCGACGGTCG TCCCGTCGCC
GGGGTGGGGC GCGAGCGCGC GGTGATCTTT CAGGAACCGC GCCTGCTGCC CTGGCTGACC
GTGCTGGACA ACGTCGCCTT CGGGCTGGAG GTGCGCGGCA TCCCGGCCGC CGAGGGTCGC
GAAAGGGCGC GGCACTATCT TCGCCTTGTC GGCCTGGCCA GGTTCGAGGC GGCCTGGCCG
CGCCAGCTTT CCGGCGGCAT GGCGCAGCGC GTGGGCATTG CGCGCGCTCT GACGGTGCGA
CCGGGGATCC TGCTTCTGGA CGAGCCCTTC GGTGCGCTGG ACGCCATGAC CAAGATGACG
ATGCAGGAGG AACTGGCCCG CATCTGGCGC GAGGAACGGG TGACGATGAT CCTTGTCACC
CACGACCTCG AAGAGGCGAT CTTCCTTGCC GACCGGGTTC TGGTGCTGTC GAAGGACAGC
ACTGATCCGG CACGGCTGAT CGATGTCGAC CTGGCGCGTC CGCGCGACCG CAGCGAGCCG
GGCTTCGTCG CCATGCGCCG CCGCCTGATG GCGGAGTTCG GCCTGCATTG A
 
Protein sequence
MGIHQSLLRG EVRVRGLSKS YSLNRNALSV LRDLDLDVNG GEILAIVGPS GCGKTTLLRI 
LAGLETPDRG KVLIDGRPVA GVGRERAVIF QEPRLLPWLT VLDNVAFGLE VRGIPAAEGR
ERARHYLRLV GLARFEAAWP RQLSGGMAQR VGIARALTVR PGILLLDEPF GALDAMTKMT
MQEELARIWR EERVTMILVT HDLEEAIFLA DRVLVLSKDS TDPARLIDVD LARPRDRSEP
GFVAMRRRLM AEFGLH