Gene Pden_5126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5126 
Symbol 
ID4583687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp642158 
End bp643000 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID639772429 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918882 
Protein GI119387848 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC AGCATCTGGA TACCCCGCCC ATTCCGCTTT CGCGCGATTC CGCCCCGGGC 
GGGTCGCTGC TGCGCCGGGG CGCCGCCGTC GCCCGCCATG GCCTGTCGCG CTATGGCCTG
CTGGCGGGCT TCCTGGTCCT GTGGCAGGTG GCCAGCACCA TGGGCTGGGT CAGCCCTGCC
GTGCTGCCGC CGCTGGACAA GATCGCCGCG GCGCTGTGGA ACGGCATCGC TTCGGGCGCG
CTGGTGGACG ACATCGCCAT CAGCCTGCAA CGCTCGGGCA TCGCCTTCGC CGGTGCCGTG
GTTCTGGGCA TCCCGCTGGG CCTGCTGATG GGCCAGATCC CGGCGGTGGA GCGGGCGCTG
GATCCGATCC TGCAACTGTT CCGCCAGACT TCGGCGCTGG CGCTCTATCC GGTGTTCATC
CTGCTTTTGG GCCTGGGCGA GACATCGAAG GTCTTCGTCA TCTTCTGGGC GACGCTGTTT
CCCGTCCTTT TGGCCACCAT CGGCGGCGTG AAGGAGGTGG ACGGCAAGCT GATCGAGATG
GCCCGGACCT ATGGCGCGTC CCGGTTGGCG GTGTTTCGCC GGGTGATCCT GCCGGCCTCG
GTGCCATCCA TCTTCGTCGG ACTGCGGCTT TCGGCCACCA CGGCGCTGCT GCTGCTGATC
GCGGCCGAGA TGATCGGTGC GAACAAGGGG CTCGGCTTCC AGGTGATGAA CGCCCAATAC
AACTTCCAGA TTCCGCTGAT GTTCGCGGCC ATCTTCCTGC TGGCGGCGCT TGGCCTGGCC
GCGAACTTTG TCCTCGTCTC CCTGCAAAAC CGTCTGTGCC GCTGGGCCGC GCCGGCCCGC
TGA
 
Protein sequence
MTLQHLDTPP IPLSRDSAPG GSLLRRGAAV ARHGLSRYGL LAGFLVLWQV ASTMGWVSPA 
VLPPLDKIAA ALWNGIASGA LVDDIAISLQ RSGIAFAGAV VLGIPLGLLM GQIPAVERAL
DPILQLFRQT SALALYPVFI LLLGLGETSK VFVIFWATLF PVLLATIGGV KEVDGKLIEM
ARTYGASRLA VFRRVILPAS VPSIFVGLRL SATTALLLLI AAEMIGANKG LGFQVMNAQY
NFQIPLMFAA IFLLAALGLA ANFVLVSLQN RLCRWAAPAR