Gene Pden_5125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5125 
Symbol 
ID4583686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp640801 
End bp642153 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID639772428 
Productputative monooxygenase protein 
Protein accessionYP_918881 
Protein GI119387847 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCA AGATTCGCCT TGGCGCCTTT CTTCCCGGCG GCGGCCAGCA TATCGCCGCC 
TGGCGCCACC CCGACCAGCC CGTCGACGGG GCGACCAGCC TGGAGTTCCA CGTCGCGCTT
GCGCAGGAAG CCGAGCGCGG GCTGTTCGAT GCCTATTTCC TGGCCGACGG CCTGGCCATC
GCCTTTGGCG GCGGCATCGA GGGCGGCAAC GCCAAGGTCG CGGGCTTCGA GCCGGTGACG
CTGTTTGCGG CGCTCGCACC CCTCACGAAG CATCTCGGCT TCATCGCCAC GGCCTCGACC
ACCTATGAAG AGCCCTATAA CCTTGCCCGC AAGTTCGCCT CGCTCGACCT GATCTCGGGC
GGGCGCGCGG GTTGGAACGT GGTGACGACA GCCACGGAAA GCGCGGCGCG GAACTTCAAC
CTCGACCAGC AGCATCCCCA TGCCTGGCGC TATCGCCGTG CGGCCGAGCA TGTCGATGTG
GTCGGGAAGC TGTGGGACAG CTTCGAGGAC GACGCCTTCA TCCGCGACAA GGAAACGGGC
GTGTTCTTCG ACACCGAGAA GGTGCATTTC ACCGATCACC AGGGCGAGCA TTTCAAGGTC
AAGGGGCCGC TCAATGTCTC GCGCTCGCCG CAGGGCCATC CGGTCATCGT GCAGGCCGGC
CAGTCCGAGG ACGGTCGCGG TCTTGCCGCC GCCACGGCCG AGGTGATCTT CACCGCGCAT
CAGCGCCTTG ATACCGCGCA GGAATTCTAT CGCGATATCA AGGCCCGCGC CCGTGGCCTT
GGCCGCAACC CCGACCATGT GCTGGTCATG CCCGGCGTCT CGCCCTTCGT CGGCCGGACC
GAGGCCGAGG CGCGCGAGAA ATACGAACGC CTTACCGACC TGATCCTGGA AGAGGACGGC
ATCGCCCTGA TCAAGGGGCT GACCGGCGGC ACGCTGGACC TGACCGGGGC GGACCTCGAC
GGCCCGCTGC CGCCGCTGGA CCCGACCGAG GGGATGAAAT CGCGCCAGGT GCTGATCCGC
CAGATCGCCG ACGAGAACGG CTTTACCATC CGCCAGCTTT ACCAGTGGAT CGCCTCGGCG
CGGGGCCATT TCACCATCGT CGGCAGCGCA GAGCAGATCG CCGACACCTT GCAGGAATGG
TTCGAGAACG AGGGCGCGGA CGGCTTCAAC ATCCTGCCGC CCTGGCTGCC CACCGGCCTG
AGCGATTTCG TGGACCTGGT GGTTCCCGAA TTGCAGCGCC GCGGCCTGTT CCGCACCGAA
TACGAAGGCC GCACGCTGCG CGAGAACCTG GGCCTGCCCT TCCCCGAGAA CCGCTGGGCG
GTCGAGCGCC GGTCGACCCA TGCGGCGGAG TGA
 
Protein sequence
MTRKIRLGAF LPGGGQHIAA WRHPDQPVDG ATSLEFHVAL AQEAERGLFD AYFLADGLAI 
AFGGGIEGGN AKVAGFEPVT LFAALAPLTK HLGFIATAST TYEEPYNLAR KFASLDLISG
GRAGWNVVTT ATESAARNFN LDQQHPHAWR YRRAAEHVDV VGKLWDSFED DAFIRDKETG
VFFDTEKVHF TDHQGEHFKV KGPLNVSRSP QGHPVIVQAG QSEDGRGLAA ATAEVIFTAH
QRLDTAQEFY RDIKARARGL GRNPDHVLVM PGVSPFVGRT EAEAREKYER LTDLILEEDG
IALIKGLTGG TLDLTGADLD GPLPPLDPTE GMKSRQVLIR QIADENGFTI RQLYQWIASA
RGHFTIVGSA EQIADTLQEW FENEGADGFN ILPPWLPTGL SDFVDLVVPE LQRRGLFRTE
YEGRTLRENL GLPFPENRWA VERRSTHAAE