Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_5116 |
Symbol | |
ID | 4583677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 634258 |
End bp | 635226 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639772419 |
Product | putative agmatinase |
Protein accession | YP_918872 |
Protein GI | 119387838 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
TIGRFAM ID | [TIGR01230] agmatinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.971195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCGAC CCCTGCACGA ACCCGTCGAC GCCGCCCTGA TCCCGCGCTT TGCCGGGCAT TCGACCTTCA TGCGCCTGCC GGCGGTCGCC AGCGCCGAGG GGCTGGATGT CGCCATCCTC GGCATCCCCT GGGACGGCGG CACCACCAAC CGCGCCGGTG CCCGCCACGG CCCGCGCGAG GTGCGCAACC AGTCCAGCCT GATGCGCCGC GTCCATCACG TCACCGGCAT CGCCCCCTAT GAACGGCTGG CCGTCGCCGA TATCGGCGAC CTGGTCGTCC AGCCCATCGA CCTGATGGCC GCGCTGCGCC AGATCGAGGA CGGCATCGCC CAGGTCTGCG CCAAGGGCGC CCTGCCGCTG AGCGTGGGCG GCGACCACCT GACGACGCTG CCGGTGCTGC GGGCGATCCA CAAGGCGGAC CCCGGGCACG GTCCGCTGGG CCTGGTGCAG TTCGATGCCC ATTCCGATAC CAACGACAGC TATTTCGGCG ACAATCCCTA TACCCATGGC ACGCCCTTCC GACGCGCCAT CGAAGAGGGC ATCCTGGACC CCAGGCGCAT GGTGCAGATC GGCATCCGCG GTTCGGTCTA TGCGGCCGAC GAGCACCAAT GGGCCAGGGA TCAGGGCGTC CGCATCATCC ATATCGAGGA ATTCGCTCGA CGCGGCCCCG ACGACGTGAT GGCCGAGGTC CGCGCCCTGA TGGGCGATGC ACCCGCCTAT GTCACCTTCG ACATCGACGG CATCGACCCT TCGATGGCAC CGGGCACCGG CACGCCCGAG ATCGGCGGCT TCACCACGCG CGAGGCGCAG GCGATGCTGC GCGGCCTTGC CGGGCTGAAC ATCGTCGGCG CCGATGTGGT CGAGGTCTCG CCGCCCTTCG ACATCGGCGG CATCACCGCG CTGACCGGCG CGACGGTGCT TTTCGAACTG CTCTGCGTGC TGGCCGCCGG CCGGGCCGGG CAGGGCTGA
|
Protein sequence | MPRPLHEPVD AALIPRFAGH STFMRLPAVA SAEGLDVAIL GIPWDGGTTN RAGARHGPRE VRNQSSLMRR VHHVTGIAPY ERLAVADIGD LVVQPIDLMA ALRQIEDGIA QVCAKGALPL SVGGDHLTTL PVLRAIHKAD PGHGPLGLVQ FDAHSDTNDS YFGDNPYTHG TPFRRAIEEG ILDPRRMVQI GIRGSVYAAD EHQWARDQGV RIIHIEEFAR RGPDDVMAEV RALMGDAPAY VTFDIDGIDP SMAPGTGTPE IGGFTTREAQ AMLRGLAGLN IVGADVVEVS PPFDIGGITA LTGATVLFEL LCVLAAGRAG QG
|
| |