| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5112 |
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| Symbol | |
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| ID | 4583673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 626607 |
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| End bp | 629312 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772415 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_918868 |
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| Protein GI | 119387834 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGC CCGGCCTCGT CCTTGCCGTC TCCTTCGGCT ATCTGCTGCT GTTGGTGGCG
GTGGCGGCGC ATGGCGACCG CCGCGCCGAT CAGGGGCGCT CGCTGATCGA CAGCAGCTTT
GTCTATGCGC TGTCCTGGGC GGTCTATTGT TCGGCCTGGA CCTATTTCGG CAGCGTCGGG
CGTGCCGCCT CGGGCGGGGT GTGGTTCCTG CCGATCTATC TGGGGCCGAT GCTGGCCATG
CTGCTGGCCT GGCTGGTGCT GCGCAAGATG GTGCGGATCG CGCGCAGCTA CCGCATCACC
TCGATCGCGG ATTTCATCGC CAGCCGCTAT GGCAAAAGCC CGCTGCTGGC GGCGCTGGTG
ACGCTGATCA CCGTGGTCGG CATCCTGCCC TATATCGCCT TGCAGCTGAA GGCGGTCTCG
GCCGGCTATG AGGCGCTGAC CGGCGGCCTG GGCCAGTCCG ATGCGGCCTG GTGGCGCGAC
GGCACGCTTT ACATGGCGCT GTCGCTGGCC GGTTTCGCAG TGGTCTTCGG CACCCGGCAC
CTCGACCTGT CCGAGCGGCA CGAGGGCATG GTCGCCGCCA TCGCCTTTGA ATCCGCGGTC
AAGCTTGCGG CCTTTCTGGC GGTCGGCGTC TTTGTCACCT ACGGGCTTTT CGGCGGCATG
GGCGACATCT GGGCGCGTGC GCAGGCCCAG CCCGACATCG CCGGCCTCTT GCGGCTTGGC
GGGCAGGGGT TCGAGGGCTT TCAGGGCGCG CAATGGTTCG CGCTGACGCT GCTGTCCATG
CTTTCGGTGC TGATGCTGCC GCGCCAGTTC CAGGTGATGG TGGTCGAATG CGTGAACGAA
CGGCATATCC TGCGCGCCTC GTGGCTGTTT CCGGCCTATC TGCTGCTGAT CAACATCTTC
GTGCTGCCCA TCGCCATCGG CGGCATGCTG ATCTTTGGCG ATGGCGGGGC GGGGGCGGAA
AGTTATGTGC TGACGCTGCC CCTGTCGCAG GGGGCGGAGT GGCTGGCGCT GCTGGCCTAT
CTGGGCGGGC TTTCGGCGGC GACCGGCATG ATCATCGTCG AGACGGTCGC GGTCTCGACC
ATGGTCTGCA ACGACCTGGT GATGCCGGCG CTGCTCAGCA GCGGCCGCTT CGCCCGCACC
GGGGGCGATC TGACGCGGGT CTTGCTGAAC ATCCGCCGTG CCGCGATCCT TCTGGTGCTG
CTGCTCGGCT ATCTTTATTT CCGCATCGCG GGCGAGGCTT ATGCGCTGGT CTCGATCGGG
CTGATCAGCT TTGCCGCGGT GGCGCAATTC GCCCCGGCGC TGCTGGGCGG CATGTATTGG
CGCGGCGCGA CGCGGGCCGG CGCGCTTGGT GGGCTGCTCG GCGGGTCGCT GGTCTGGGCC
TATACCCTGA TGCTGCCGTC GCTGGCGCGT TCGGGCTGGA TCGGGGCCGG GTTCCTCGAC
GGCCCCTTCG GCCTGGCGTT CCTGGCACCG CAGCACCTGT TCGGCCTGAC CGGCTTTGAC
GAACTGACCC ATTCGCTGTT CTGGAGCCTG ATGGTCAATA TCGGGCTTTA CGTCGGCCTG
TCGCTCAGGG GTCGCGTCTC GGCGCGCGAG GCCAGCCAGG CGCTACTGTT CGTCGAGGTG
TTCCAGCGGG GGCAGGCGCA GCCGGTCTTC TGGCGCGGTA GGGCGCGGCT TGAGGATCTG
CGCCGGCTGG CGGGCCGCTT CCTGGGCGCG GCGCGGGCCG AGGCGCTGTT TCGCGACCAC
GCGCGCGAGA CCGGGACCGC GCTGGACAGC CTGACCGCCG ATGCCCGGCT GGTGGACCGG
GTCGAGCGCC AGATCGCCGG CGCCATCGGC ACCGCCTCGG CCCGCGTCAT GGTCGAATCG
GCGGCGCAGG AGGAATCGCT GAGCCTGGGC GACGTGCTGG AGATCATCGA CGAGGCGTCG
CAGGTGCGCA CCTATGCCCG TGAACTGGAA GAGGCCACGG TCGAGCTGCG CGCCGCCAAT
GAAAAGCTGA AAAGCCTCGA CCAGCTCAAG GACGACTTCA TGTCCTCGGT CACGCATGAG
CTGCGCACGC CGCTGACCTC GATCCGGGCG CTGACCGAGT TGATGCTGGA CACGCCCGAC
ATCCAGCCCC AGGAGCGCGA GGAGTTCCTG AACATCATCC TGTCGGAAAG CGAAAGGCTG
AGCCGGCTGG TCAACCAGGT GCTGGACCTT GCCAAGATCG AATCCGGCAT GGCGGAATGG
CACAATACCG ACGTGGACAT GAAGGCGCTG ATCGTGGCGG CCCTGCGGTC CACCGCCGAA
CTGTTCCGCG AGCGCGGGGC CGAGGTGCTG GCCGACCTGC CCGAGCAGGT GCCGATGGTG
CTGGCCGATC CCGACCGGCT GACGCAGGTG CTGGTCAACC TGCTGTCGAA TGCCGCGAAA
TTCGTCCCCG AGGGCCGCGG CCGGGTCGAG GTGGCGCTGC GCCATCGGGG TGACGAACTG
GTGGTCACGG TGCGCGACAA CGGCCCCGGC GTCGCGCCCG AGGACCAGGC CGCCGTCTTC
GACAAGTTCC GGCAGGGCGG CGAGGCCGGC AACCGCCCGC CCGGCACCGG GCTCGGGCTT
CCGATCAGCC GGCAGATCGT GGTTAATCTG GGGGGCAGGA TGTGGCTCGA CAGCCAGCCG
GGGCAGGGCG CGTGCTTCGC CTTCAGCCTG CCGCTTCGCA GCAAGGGAGG GTCCGATGAC
GGATAG
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| Protein sequence | MIQPGLVLAV SFGYLLLLVA VAAHGDRRAD QGRSLIDSSF VYALSWAVYC SAWTYFGSVG
RAASGGVWFL PIYLGPMLAM LLAWLVLRKM VRIARSYRIT SIADFIASRY GKSPLLAALV
TLITVVGILP YIALQLKAVS AGYEALTGGL GQSDAAWWRD GTLYMALSLA GFAVVFGTRH
LDLSERHEGM VAAIAFESAV KLAAFLAVGV FVTYGLFGGM GDIWARAQAQ PDIAGLLRLG
GQGFEGFQGA QWFALTLLSM LSVLMLPRQF QVMVVECVNE RHILRASWLF PAYLLLINIF
VLPIAIGGML IFGDGGAGAE SYVLTLPLSQ GAEWLALLAY LGGLSAATGM IIVETVAVST
MVCNDLVMPA LLSSGRFART GGDLTRVLLN IRRAAILLVL LLGYLYFRIA GEAYALVSIG
LISFAAVAQF APALLGGMYW RGATRAGALG GLLGGSLVWA YTLMLPSLAR SGWIGAGFLD
GPFGLAFLAP QHLFGLTGFD ELTHSLFWSL MVNIGLYVGL SLRGRVSARE ASQALLFVEV
FQRGQAQPVF WRGRARLEDL RRLAGRFLGA ARAEALFRDH ARETGTALDS LTADARLVDR
VERQIAGAIG TASARVMVES AAQEESLSLG DVLEIIDEAS QVRTYARELE EATVELRAAN
EKLKSLDQLK DDFMSSVTHE LRTPLTSIRA LTELMLDTPD IQPQEREEFL NIILSESERL
SRLVNQVLDL AKIESGMAEW HNTDVDMKAL IVAALRSTAE LFRERGAEVL ADLPEQVPMV
LADPDRLTQV LVNLLSNAAK FVPEGRGRVE VALRHRGDEL VVTVRDNGPG VAPEDQAAVF
DKFRQGGEAG NRPPGTGLGL PISRQIVVNL GGRMWLDSQP GQGACFAFSL PLRSKGGSDD
G
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