| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5072 |
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| Symbol | |
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| ID | 4583633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 584405 |
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| End bp | 585964 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772375 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_918828 |
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| Protein GI | 119387794 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.236333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.758542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTCA ATCCGACGGG GCAGGGGCTG ACCAGGCGGG GCTTGCTGGC CGGCGCGGCA
GGCATGGCGG CGGCGGGGCT GATCCTGCCG CGCGGCGCGC GCGCGCAGGA GGCGCGGCGC
GGCGGCAGGC TGCGCATCGG CCATCTGGGC GGCGCGACCT CGGACACGCT GGACCCGGCG
ACCTATGCCG CGGGGCCGGT GGTGACGGCG ATGCTGGCGG TCTGCAACAA CCTGGTCGAG
ATCGACGCCA AGGGCCAGGC CGTGCCCGAA CTGGCCGAGT TCGAGCCCGA TGCCGAGGCC
CGCGTCTGGA CCTTCCGCCT GAAGGACGGC GTCACCTTCT CGGACGGGCG CAAGCTCACG
GCCAGGGACG TGATCGCGTC CTTCGACCAT CATCGCGGCG CCGATACCAA GTCCGGCGCC
AAGGGCTCGC TTGAGCAGGT CAAGGAAATC CGCGCCGATG GCGACAATGT CGTGGTCTTC
GAACTGACCT CGGGCAATGC CGATTTCGCC TATCTGACCT CGGACTATCA CTTCGTCATC
ATGCCGGCGA ACGAGGACGG CACGCTGGAC TGGCAGTCGG GTCTGGGCAC CGGCGGCTAT
GTGCTGGAGA ACTTCGAGCC GGGCGTGCGC ATCACGCTCA AGCGCCGCGA CGACTACTGG
AAGCCCGACC GCGCCTGGTT CGACGAGGCG GTGCTGCTGA CCATCAACGA TGCCACCGCC
CGGCAGAATG CGCTGATGAC CGGCGAGGTC GATGTCATCA ACTCGCCCGA CCTGGCTACC
CTGCACCTGT TGCAGCGCCG GCCGGGCCTG CAACTGGTCG AGGTGACGGG GACCGCGCAT
TACACCATGC CGATGTTCTG CGACCAGGCG CCCTTTACCG ATCCGAACCT GCGGTTGGCG
CTGAAATACG CCATCGACCG GCAGGAGGTG CTGGACAAGG TGCTGCGCGG CCATGGCCAG
ATCGCCAATG ACAGTCCCAT CGCGCCGGCG AACCGCTTCT TTGCCGCCGA CCTGCCGCAG
CGGGCCTATG ACCCGGACAA GGCGAAGCAT TACCTGAAAC AGGCCGGCAT GGAGGGGCTG
AAGGTCGAGA TTTCCGCCTC GGACGCGGCG TCGGTCGGGG CGCTGGACAT GGTGCAGCTG
TTCCAGCAAT CGGCCAAGGC CGCTGGAATC GACCTGACCG TCAAGCGCGA GCCGGACGAC
GGCTATTGGT CGAATGTCTG GCTGAAGAAG CCCTTTTGCG TCAGCTACTG GAACGGCCGC
CCGACCGAGG ACGACATGTT CAGCCTGGTC TATGCCCGGG GCGCCGAGTG GAACGAAAGC
CACTGGGACA ACGAGCGATT CAACGAACTG CTGCTGAAGG CGCGGGCCGA GCTGGACGAA
GGCCTGCGCG CCGAGATGTA TCGCGAGATG CAGGGGCTGG TTTCCGAGGA CGGCGGCACC
ATCATCCCGA TTTTCGTGAA CTATATCGAC GTGGCCAATG ACAAGGTGGC GCATGGCGAG
GTGGCGTCGA ACCGCTTCCT CGACGGCTGG AAGATCGTGG AACGGTGGTG GCAGGCATGA
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| Protein sequence | MSFNPTGQGL TRRGLLAGAA GMAAAGLILP RGARAQEARR GGRLRIGHLG GATSDTLDPA
TYAAGPVVTA MLAVCNNLVE IDAKGQAVPE LAEFEPDAEA RVWTFRLKDG VTFSDGRKLT
ARDVIASFDH HRGADTKSGA KGSLEQVKEI RADGDNVVVF ELTSGNADFA YLTSDYHFVI
MPANEDGTLD WQSGLGTGGY VLENFEPGVR ITLKRRDDYW KPDRAWFDEA VLLTINDATA
RQNALMTGEV DVINSPDLAT LHLLQRRPGL QLVEVTGTAH YTMPMFCDQA PFTDPNLRLA
LKYAIDRQEV LDKVLRGHGQ IANDSPIAPA NRFFAADLPQ RAYDPDKAKH YLKQAGMEGL
KVEISASDAA SVGALDMVQL FQQSAKAAGI DLTVKREPDD GYWSNVWLKK PFCVSYWNGR
PTEDDMFSLV YARGAEWNES HWDNERFNEL LLKARAELDE GLRAEMYREM QGLVSEDGGT
IIPIFVNYID VANDKVAHGE VASNRFLDGW KIVERWWQA
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