Gene Pden_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5033 
Symbol 
ID4583594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp544464 
End bp545039 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content69% 
IMG OID639772336 
ProductBioY protein 
Protein accessionYP_918789 
Protein GI119387755 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.301047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA ATATCGCCCA GATCGCCCTT TTCGCCGCGA TGATCGCGGC GCTGGGGCTG 
GTGCCGCAGA TCACCCTTGG CTTCGGCGTG CCGATCACGG CGCAGACGCT GGGCGTCATG
CTGGCCGGTG CGGTACTGGG CGCGCGGCGT GGCGCTGCGG CTGCGGGGCT GTTCCTGCTG
CTGGTGGCAC TCGGCCTGCC GCTGCTGGCG GGCGGACGCG GAGGGCTTGG CGCCTTCGCC
GCACCGACGG CGGGTTTCGC GCTTGGCTTT CCGGTCGCCG CCTTTGCCAC CGGCTTCTTC
GTCGAGCATG TCCGACTGCG CTCGGCCGGA CTTGCGGCGG GGCTGGGTGC GGTCTTTGGC
GGGATCGCGA TCCTCTATAT CTGCGGCGCC ACCGGGCTTT CCATCGTCAG CGGCAAGAGC
CTGGCCGAAG CCTTCACGCT GATCGCGGTC TTCATTCCCG GCGACCTGCT GAAAGCGGCG
ATCACCGGAA TGCTGGTGCA GGCATTGGCC AAGGTGCGAC CGCAGACGCT GGCCTGGCAT
CGGGACAGCG CAAGCGTGAC CCAGACGCGG CTGTGA
 
Protein sequence
MERNIAQIAL FAAMIAALGL VPQITLGFGV PITAQTLGVM LAGAVLGARR GAAAAGLFLL 
LVALGLPLLA GGRGGLGAFA APTAGFALGF PVAAFATGFF VEHVRLRSAG LAAGLGAVFG
GIAILYICGA TGLSIVSGKS LAEAFTLIAV FIPGDLLKAA ITGMLVQALA KVRPQTLAWH
RDSASVTQTR L