Gene Pden_5017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5017 
Symbol 
ID4583578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp528519 
End bp529106 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID639772320 
Producthypothetical protein 
Protein accessionYP_918773 
Protein GI119387739 
COG category[R] General function prediction only 
COG ID[COG3560] Predicted oxidoreductase related to nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.998448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA TTCTGAAAAA CCGCCGCTCG CAATATGCCC TGGGGGCCGA ACTTCCCCTG 
CCCCAGGATG AGGTCGATCA CCTGATCCGC GAGGCCATCC GGCTGGCCCC CTCTTCCTTC
AACTCGCAAA GCTCGCGTGC CGTCATCCTG TTCAACGGCG AAAGCCGCAG GTTCTGGGAT
CTTGTGAAAG ATGCCTTGCG TGCCATCGTT CCGGCCGAGG ACTTCCCCAG GACCGAAAGG
CGCCTTGCCG GTTTCGCCGC CGGGGCGGGA ACGGTGCTGT TCTTCGAGGA CCAGGCGGTG
GTCGCCGATC TGCAAAGGAA ATTCCCGCTC TACGCCGAGA ACTTCCCGAT CTGGTCCGAG
CATTCCACCG CGATGGCGCA ACTCGCGACC TGGACCGCAT TGAGCGATGC CGGAATCGGC
GCCAGCCTGC AGCACTATAA TCCACTGGTC GACGATGAGG CGGCAAGGGC ATGGGAACTG
CCGGCGACAT GGAGGCTGTG CGCGCAGATG CCCTTTGGAT CGAACGAAGG CGAAATCGGC
CAAAAGAGCT ACATTGACGA CCAGCAGCGC TTCCACACCT TTGGGTAA
 
Protein sequence
MLDILKNRRS QYALGAELPL PQDEVDHLIR EAIRLAPSSF NSQSSRAVIL FNGESRRFWD 
LVKDALRAIV PAEDFPRTER RLAGFAAGAG TVLFFEDQAV VADLQRKFPL YAENFPIWSE
HSTAMAQLAT WTALSDAGIG ASLQHYNPLV DDEAARAWEL PATWRLCAQM PFGSNEGEIG
QKSYIDDQQR FHTFG