| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4988 |
|---|
| Symbol | |
|---|
| ID | 4583549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 498993 |
|---|
| End bp | 500036 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639772291 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_918744 |
|---|
| Protein GI | 119387710 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC GGACGATACA GGATGCCAGC CTTGTCGCGG TCGTTCTGAT CACGACGGTC
GCGCTGATCT GGGTCGTGCT GCCATTCTAT GGCGGCGTGC TTTGGGCGGT CATCCTTGCC
ATCCTGTTCA GCCCGCTCCA CGACCGGCTG GAGCATGTGC TGGGCGGACG GCGCAATCTG
GCCGCCTTGC TCAGCGTGCT GGCCTGCATC TTCATCGTCG TCATTCCCGC CACGCTCATC
CTGGGGGCGC TGGCCCGGCA GGCGACGAGC GTCTATCAAA GCGTCAGCTC GCAAGAGCCG
GATCTGGCGG CGGTCATGGA CCAGGTTCGC GGCGCCATGC CGTCCTTCGT CCTGGATGCG
CTGTCGGCGA TGAACCTCGG CAGCTTCGAG GAGATCCAGT CCCGGCTGGT CTCCTTTGTC
GGGCAGGCGG CGCAGTTCAT CGCGTCCCGG GCGATGGTGA TCGGGCAGGG GGCCGCGCAG
TTCTCGATCG GCCTCGGCGT CATGCTCTAC GTGCTGTTCT TCCTGTTTCG CGACGGCCGG
GGACTGGTCG GGTCCATCAG CGCCGCCAGC CCGCTGAGCG CGCCGCACAC CCGGCACATC
ATGCAGAAAT TCGTCGATGT GGTGAAGGCG ACCGTCACCG GCAACGTGGT CATCGCGACC
ATCCAGGGCA CCATCGGCGG CGTGACCTTC TGGCTGGTCG GGATCGAGGC CGCGCTGCTC
TGCGGCGTGA TCATGGGCGT GCTGTCGCTG CTGCCCGCCG TGGGCGCGTT CCTGGTCTGG
CTGCCTTTCG CCGTCTATTA CCTGATCACC GGCGCCTACC TGAAGGGCAT CGTCATCATG
GCGGTCGGGG TTTTGGTCAT CAGCACCATC GACAATCTCC TGCGCCCGCC GCTGGTGGGC
CGGCGCAGCA GCCTGCCGGA TTACGTCGTG CTGGTCTCGA CCCTGGGCGG CATTTCGCAG
ATGGGGATGA ACGGCTTTGT CGTCGGCCCT CTGATCGCGG CGTTCTTCAT CGCGGTCTGG
AGCCTGTTTC GCGACGAGCA GTGA
|
|---|
| Protein sequence | MKKRTIQDAS LVAVVLITTV ALIWVVLPFY GGVLWAVILA ILFSPLHDRL EHVLGGRRNL
AALLSVLACI FIVVIPATLI LGALARQATS VYQSVSSQEP DLAAVMDQVR GAMPSFVLDA
LSAMNLGSFE EIQSRLVSFV GQAAQFIASR AMVIGQGAAQ FSIGLGVMLY VLFFLFRDGR
GLVGSISAAS PLSAPHTRHI MQKFVDVVKA TVTGNVVIAT IQGTIGGVTF WLVGIEAALL
CGVIMGVLSL LPAVGAFLVW LPFAVYYLIT GAYLKGIVIM AVGVLVISTI DNLLRPPLVG
RRSSLPDYVV LVSTLGGISQ MGMNGFVVGP LIAAFFIAVW SLFRDEQ
|
|---|
| |