Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4956 |
Symbol | |
ID | 4583517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 462656 |
End bp | 463975 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639772259 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_918712 |
Protein GI | 119387678 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.579279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.246978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGC CATTGCTGCA TATCCGAACC CCTGACAGCC TGCCCCCGGA AGCCGACGCG GTCGTCATCG GCGGCGGGAT CGTCGGCACC TGCACCGCCT ATTATCTGGC CCGTCGCGGC GTCCGGGTGG CGCTGGTCGA AAAGGGCTGG ATCGGGGCCG AGCAGTCCAG CCGCAACTGG GGCTGGTGCC GCCAGCAGAA CCGCGATGCG CGCGAATTGC CGATGGCGAC GAAAAGCCTG GACCTGTGGG ACGCGCTGGC CGCCGATATC GGCGAAAGCG TGGGGTTCCG CCGCTGCGGG CTGCTGTATC TTTCCGACGA CGAGGCCGAG ATCGCGGGCT GGGCGCGCTG GCGCGATTTC GCGCGCGGGC AAGGGGTCGT GACCCATATG CTGACGCCCG CCGAGGCCGC CGGGCGCGGC CGCGCCACGG GCAAGGCGTG GAAGGGCGGC GTGTTCTCGC CCAGCGACGG CATCGCCGAC CCGGAACGCG CGGCCCCCGT CATCGCGCGC GGGGTCGAGA AATTCGGCGG CTCGGTCCAT CAGTCCTGCG CCGCGCGCGG GCTGGAGCTC GAGGCAGGCC GGGTCGCGGG CGTCGTCACC GAAAAGGGCG TGATCCGCAC CCGGATCGTG ATCCTGGCCG GCGGGGCCTG GGCCTCGTCC TTCTGCCGGC AATACGGGGT GGCGTTCCCG CAAGCGGCGG TGCGGTCCTC GATCCTTGCC GTGGGGCCGG GGGTCGAGGG GCCGGACGCG CTGCATACCG CCCGCGTCTC GGTCACCCGG CGGGGCGATG GCGGCTATAC GCTGGCGGTC TCGGGCTATG CGCGCGTCGA TCCGACGCGG CAGCAATTGC GCTTTGCCAG GCATTTCCTG CCGATGTTCG CCCGGCGCTG GCGCGTGCTG CGTCCGGGCG GGGCAGAGGG CTGGCGCTCG GGCCACGAGA CGCTGGCCCG CTGGCGGCTG GACCGCCCGA CCCCGATGGA GCGGATGCGT ATCCTGGACC CCAGGCCCGA CGCCGCGATG ATCCGCGAGA CGCTGGCCCG TGCCCGCGTG CTGCTGCCGG GGCTTGCGGA TATTCCGGTG ACGGCGCAAT GGGCGGGCTA TATCGATTCG ACCCCCGACG GTGTTCCGGC CATCGGCGAA ACCGAGGTGC CGGGCCTGAT TCTGGCCGCG GGCTTCAGCG GCCACGGTTT CGGCATCGGT CCCGGTGCGG GCCATATGAT CGCCGATATG GTGACCGGCG CCACGCCCAT CCTTGATCCC GCGCCCTACC ACCCCTCGCG CTTCCGGCAG GGAAGCTGGG GCAAGGTTTC GGATTTCTGA
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Protein sequence | MPAPLLHIRT PDSLPPEADA VVIGGGIVGT CTAYYLARRG VRVALVEKGW IGAEQSSRNW GWCRQQNRDA RELPMATKSL DLWDALAADI GESVGFRRCG LLYLSDDEAE IAGWARWRDF ARGQGVVTHM LTPAEAAGRG RATGKAWKGG VFSPSDGIAD PERAAPVIAR GVEKFGGSVH QSCAARGLEL EAGRVAGVVT EKGVIRTRIV ILAGGAWASS FCRQYGVAFP QAAVRSSILA VGPGVEGPDA LHTARVSVTR RGDGGYTLAV SGYARVDPTR QQLRFARHFL PMFARRWRVL RPGGAEGWRS GHETLARWRL DRPTPMERMR ILDPRPDAAM IRETLARARV LLPGLADIPV TAQWAGYIDS TPDGVPAIGE TEVPGLILAA GFSGHGFGIG PGAGHMIADM VTGATPILDP APYHPSRFRQ GSWGKVSDF
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