| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4896 |
|---|
| Symbol | |
|---|
| ID | 4583457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 401288 |
|---|
| End bp | 402316 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639772199 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding subunit |
|---|
| Protein accession | YP_918652 |
|---|
| Protein GI | 119387618 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.699955 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGC AAGCCCCTTC GGCGGCCCTG CTGTCGCTGT CCTGCATCGC CGTCCGCGAC
GAGACGCCCA CCGTCAAGAC CTTTCGCCTG CGCGCGGACA GCGGCCCGGT AGGTTTCGTG
CCCGGTCAGG CGCTGGTGCT GAAGGTGCCC TTGCCGGGTG GCCCGGTCTG GCGCAGCTTC
ACCATCTCGG GCGGCACGGG GGCCGAGCTT GAACTGACGG TCAAGGCGCA GGCACCGGGC
GGCGCGACCC GCTGGCTGCA TGAAAATCTG CGCGAAGGCA GCGGCATCGA GGCCCGCCCC
CCGCGCGGCG CCTTCACGCT GGGGCTGCGC GACAACGACC GGCTGGCCTT CGTCTCGGGC
GGATCGGGGG CCACGCCGAT GATGGCGATG CTGCGGCATC TGGCGCAAAC CGACCCCGAG
GCCGATCTTG CGTGGTTTCA CGCCGCACGC AATCCGGCCG AGATCCTCTT TGCCCGCGAA
CTGGCCGAGA TGCAGGGCCG GATGCCCAAC CTGACGGTGG CGGTCGGCGT CAGCAAGGCC
GCCCCGGGCT GGTTCGGTTA TCGCGGGCGG GTCGACCGGA CCCGGCTGGC CACCGCCATT
CCCGATCTGG GCCGGCGCGA GGTGTTCTGC TGCGGTCCGC AGGGCTTCAT GCAGGAGGTC
CGGCTGATCC ATGCCGCCGA GGGTGGCGTG CGGACGCAGT TCCACACCGA AAGCTTTGGC
GCCGCCGCCC CGGCCGCCGC GCCCATGATC GAAACCGCGC CGGACAGCCC CGCCTTTGGC
CTGACCGTGA ACGGCCGCGC CATCGGCATC CGCCCGGACG AGACGCTCTT GCAGGCCAGT
CTGCGCCAGG GGGTCGTCAT CCCCTGCGGC TGCGGCGAAG GAATGTGCGG AACCTGCATG
GTGCAACTCG TCTCGGGCCG GGTGGACAGC CGGCAGAATG GCGGGCTGAC GCCGGAAGAG
GCGGCCGAGG GTTATGTGCT GGCCTGCTCG ACCCGCGCGG CGTCGGATGT CGAGATCAAG
CTGGCCTGA
|
|---|
| Protein sequence | MDMQAPSAAL LSLSCIAVRD ETPTVKTFRL RADSGPVGFV PGQALVLKVP LPGGPVWRSF
TISGGTGAEL ELTVKAQAPG GATRWLHENL REGSGIEARP PRGAFTLGLR DNDRLAFVSG
GSGATPMMAM LRHLAQTDPE ADLAWFHAAR NPAEILFARE LAEMQGRMPN LTVAVGVSKA
APGWFGYRGR VDRTRLATAI PDLGRREVFC CGPQGFMQEV RLIHAAEGGV RTQFHTESFG
AAAPAAAPMI ETAPDSPAFG LTVNGRAIGI RPDETLLQAS LRQGVVIPCG CGEGMCGTCM
VQLVSGRVDS RQNGGLTPEE AAEGYVLACS TRAASDVEIK LA
|
|---|
| |