Gene Pden_4894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4894 
Symbol 
ID4583455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp398413 
End bp399606 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID639772197 
ProductFAD dependent oxidoreductase 
Protein accessionYP_918650 
Protein GI119387616 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCGA ATAACCCCAT CCCCGGCGTC CACTCGGATG ATGACACGCG CGGCGCCTCG 
GTCATCGTGA TCGGCGGCGG CGTCACTGGC CTTTCCACTG CCTTCTGGCT GGCCGAGGCG
GGCGTCGAAG TTCTGGTGCT GGAACGCGGC ATCGTCGGCT GGGAGGCGTC GGGACGCAAT
GGCGGCGGTT GCTCGCACCA CCACAGCCCG CTTTTCGCCG AGGAACAGCG GCTGTGGCCG
ATGATGGACG AGTTGCTGGG CTATCCGACC GAGTTCCGGC CGAACCGCAT CCGCATCGCG
CTGTCGGCCG AGCAGTTGAC GCTCTACGGC CGTGCCGTGG CCAATGCCCG CAAGCAGGGC
TTTCGCGCCG ACGATCTGGA CGCGCAGACC GTTCGCGAAC TGGTGCCGCT GGCCGGGAAC
AACGTCCATG CCGGGCATTA TTACCACTTT GGCGGCCATG CGAATCCGCA CCGCACCGTG
CAGGCCTATG CCTGGGCGCT GCGCGACCGG GGCGGGCGGG TGCGCCAGCA CGTCACCGTT
ACCGGCTTCA GGCGACAGGG CGACCGGGTG ACGGCGGTCG AGACCGACAA GGGCGTCTTC
TGCTGCGATC ATCTGGTCAT CGCGGCGGGC CCGCAGACCG GCAGGCTGGC CGCGATGCTG
GAGGTGGACA TCCCCATGCG TGCGGCCCGC GCCGAGATGA TCGTCACCGA ACCCTTGCCG
CTGATGCCGC TGGGGGGGAT TGACGGCAAC GGGCTATATG GCCGCCAGAC CCTGCGCGGC
AACCTGGCCT ATGGCGGCGG TCCGCATGAA TGGGTCGAGA CCGAGGCGCA ACCGGGCGGG
CCGCGCCCCT CGACCCCGCT GGCGGGCAGC ATCGCCCGGC GCGTGGCCGA GCTTCTGCCC
AAGGCCGCCC ATGCCCGCGT CATACGCAGC TGGTCGGGCA TCATCGAGAA CACCCCCGAT
GGCCGCCCGG TCATGGACCG CCCGGCACCG TGGGAGAACC TGACCGTCGC CACGCTGTCC
GGCGTGGGCT TCGGCCTGTC GCCCGCCTCG GGCCGGGCGT TGATGCAACT GGTGATGCAG
GGGCACTGCG ATTTCGCCGA TCTCTCCAGC TTGCGGCTGA GCCGCTTCAG CCGGCTCGAG
CCGGATTGGG ACGCGCTTCA GGGCTGGCTG CCCGCCTCGA TGGCGACGGC CTGA
 
Protein sequence
MSANNPIPGV HSDDDTRGAS VIVIGGGVTG LSTAFWLAEA GVEVLVLERG IVGWEASGRN 
GGGCSHHHSP LFAEEQRLWP MMDELLGYPT EFRPNRIRIA LSAEQLTLYG RAVANARKQG
FRADDLDAQT VRELVPLAGN NVHAGHYYHF GGHANPHRTV QAYAWALRDR GGRVRQHVTV
TGFRRQGDRV TAVETDKGVF CCDHLVIAAG PQTGRLAAML EVDIPMRAAR AEMIVTEPLP
LMPLGGIDGN GLYGRQTLRG NLAYGGGPHE WVETEAQPGG PRPSTPLAGS IARRVAELLP
KAAHARVIRS WSGIIENTPD GRPVMDRPAP WENLTVATLS GVGFGLSPAS GRALMQLVMQ
GHCDFADLSS LRLSRFSRLE PDWDALQGWL PASMATA