Gene Pden_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4892 
Symbol 
ID4583453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp395991 
End bp397316 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content72% 
IMG OID639772195 
ProductMmgE/PrpD family protein 
Protein accessionYP_918648 
Protein GI119387614 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGC CCTTTCACGA CTTCCTGCAC GACATGCGTA TGGCGGACAT GCCGGAGCCG 
GTGCTGGACC TCGGCCGCCG TTGGCTTCTG GACCTGCTGG GGGTCGCGGC GGGCGGCAGC
CGGACACGGC TGTCGCGCAT CATCCGCGAC CATGCGGCGG CGCATTTCGG CGCAGGCGGC
CGCGCTGCCC CGATGCTGAT GGATGGCCGC ATGGTCAGCC CGGCGGGGGC GGCGCTGGCG
GGCGGCATGA CCATCGACGC GCTGGACGGC CATGACGGCC ACAAGCTGAC CAAGGGCCAT
GTCGGTTGCG GCAGCCTGCC CGCCCTGCTG GCGCTGATGC AGGCCGAAGG GCGGGCGGAC
GACCGCGAGT TTCTGGCCGG CCTGGTCATC GGGTACGAGG TCGGAACGCG CGCAGGCATC
GCGCTGCACC GCACCGCCTG CGACTATCAC ACCTCGGGTG CCTGGATCGC GGTTGCGGCG
GCGTCGCTGG GCGCGCGGGT GCTGGGACTG GACGCGGCAC GGACGCGCGA GGCCGTGGGC
ATCGCCGAAT ATCACGGCCC GCGCAGCCAG ATGATGCGCT GCATCGACCA TCCGACCATG
GTCAAGGACG GTTCGGGCTG GGGCGCGATG GCCGGGGTCT CGGCCGCCTA TCTGGCGGCG
GAGGGATTCA CCGGCGCCCC GGCGATCATC GTCGAGGGCG CGGATGTCGC CGACCTGTGG
GCCGATCTGG GCACGAACTG GCGCATCGCC GAGCAGTATT TCAAGCCCTG GCCGGTCTGC
CGCTGGGCGC AGCCCTCCGT GCAGGCGGTG CTGGACCTAC GGGCGCGGCA TGGCGTGACC
GCCGATCAGG TCGAGCGGAT CGAGATCACC ACCTTTCACC AGTCCCGCCG CCTTGCCGCC
CGCAATCCGG CCAGCACCGA AGAGGCGCAG TATTCCACTG CCTATCCCGC CGCCGTGGCG
CTGGTGCGGG GCCGCGTCGA TCCGGCGGAC GTGGCCGAGG ACGGCTTGGC CGACCCGCTG
ATCCGCAGCC TTGCCGCCGG CATGACCGTC ACCGAGCGCG AGGATTTCAA TGCCGCCTTC
CCGGCCCGCC GGTTTGCCGA TGTGCGGCTG GTGATGAAGG ACGGCCGGGT GCTGGAATCC
GGCCCGACCG AAGCGGCGGG CGATCCCGAG GCGCCGGCCC CGATGGATGC GGTGCGCGCC
AAGTTCCGCG CCTATGCCGC GCCGGTTCTG GGCAAGGCTC GCACCACCGA TCTGGAAAGG
GCGGTGGACC GGCTGGGCGA CGGCGGCGGC ACGACGGCGC TGTTCGGCCT GCTGGGCGCG
ACCTGA
 
Protein sequence
MTSPFHDFLH DMRMADMPEP VLDLGRRWLL DLLGVAAGGS RTRLSRIIRD HAAAHFGAGG 
RAAPMLMDGR MVSPAGAALA GGMTIDALDG HDGHKLTKGH VGCGSLPALL ALMQAEGRAD
DREFLAGLVI GYEVGTRAGI ALHRTACDYH TSGAWIAVAA ASLGARVLGL DAARTREAVG
IAEYHGPRSQ MMRCIDHPTM VKDGSGWGAM AGVSAAYLAA EGFTGAPAII VEGADVADLW
ADLGTNWRIA EQYFKPWPVC RWAQPSVQAV LDLRARHGVT ADQVERIEIT TFHQSRRLAA
RNPASTEEAQ YSTAYPAAVA LVRGRVDPAD VAEDGLADPL IRSLAAGMTV TEREDFNAAF
PARRFADVRL VMKDGRVLES GPTEAAGDPE APAPMDAVRA KFRAYAAPVL GKARTTDLER
AVDRLGDGGG TTALFGLLGA T