| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4825 |
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| Symbol | |
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| ID | 4583387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 323332 |
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| End bp | 325164 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772129 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_918582 |
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| Protein GI | 119387548 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.185194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.513387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAAAA GGACCGAGTT CCACATCTGG TATTGGATCC TGGCCTTCCT GGCCGTGATC
CTGATCCAGG ACCTGGTGTC CGGCGCGCGC GACATCGCGC CGATCAGCTA CAGCCAGTTC
GAAACCTATC TGCAACAGGG CCGCATCTCG TCCGTGGCGG TGGGCGGCGA CCGGATCACC
GGCAGCTTCA GCACCCCGGT CGATGGCCGC AACCAGTTCG TCACCACGCT GGTCGATCCG
GCGATCCTGG AGCGCATCGA CCAGGCCGGG GTCGAGATCA GCGGCGTGCC GCAGAACACC
TGGCTCGGCA CGCTGCTGTC CTGGGTGGTG CCGGTGGTGC TGTTCCTGGC GCTGTGGATG
TTCGTGTTCC GCAAGTTCGC CGAGCGTCAG GGCCTGGGCG GCTTCATGCA GGTCGGCAAG
AGCCGGGCCA AGGTCTATAT GGAAAAGGAA ACCGGCGTGA CCTTTGCCGA CGTGGCCGGC
GTGGACGAGG CCAAGGCCGA GCTCCAGGAG ATCATTGCCT TCCTGCGCGA CCCCGAGGGC
TATGGCCGCC TTGGCGCGCG CATCCCCAAG GGGGTGCTGC TGGTCGGCCC GCCCGGCACC
GGCAAGACTC TGCTGGCGCG GGCCGTGGCG GGCGAGGCGG GGGTGACCTT CCTGTCGATC
TCGGGCTCGG AATTCGTCGA GCTGTTCGTC GGCGTCGGCG CCGCCCGGGT GCGCGACCTG
TTCGAGCAGG CCCGCAAGAG CGCGCCGGCC ATCATCTTCA TCGACGAACT CGATGCGCTT
GGCCGCGCCC GCAACTCGGG CCAGTTCACC GGCGGCAACG ACGAGCGCGA GCAGACGCTG
AACCAGTTGC TGTCCGAGCT GGACGGCTTC GACCCCTCGT CGGGCGTCGT GCTGTTGGCC
GCGACCAACC GGCCCGAGAT CCTGGACCCC GCGCTGCTGC GTGCCGGCCG CTTCGACCGG
CAGGTGCTGG TGGACAAGCC CGACAAAAAG GGCCGCATCG ACATCCTGCG CGTGCATATG
AAAAAGGTGC GGCTGGCCCC GGATGTCGAG GTCGAGCAGG TCGCGGCGCT GACCCCGGGC
TTTTCCGGCG CCGACCTGGC CAATCTGGTG AACGAGGCGG CGCTGCTGGC CACCCGGCGC
AGTGCCGATT CCGTCGCCAT GGCCGATTTC AACCATGCGG TCGAGCGCAT CCTTGCCGGG
CTGGAAAAGC GCAACCGCCT GCTGAATCCG CGCGAACGCG AGATCGTCGC CTGCCACGAG
ATGGGCCATG CGCTGGTCGC CATGGCGCTG CCCGGCGTCG ATGTGGTCCA CAAGGTCTCG
ATCATCCCGC GCGGCATCGG CGCGCTCGGC TATACCATCC AGCGCCCGAC CGAGGATCGC
TTCCTGATGA CCCGCGACGA GCTGGAGAAC AAGATCGCCG TGCTGCTGGG CGGGCGCGCG
GCCGAGAGCA TCGTCTTTGG CCATCTCTCG ACCGGCGCGG CGGACGATCT GGTCAAGGCG
ACCGACATCG CCCGCGCCAT GGTCACGCGC TATGGCATGG ACCACGACCT GGGCCATGTC
AGCTACGACA GCGAGCGCCC CGGCTTCCTG GGCGAGAACG AGCAGGGCTC TTGGCTGAGC
CGGCGCTATT CCGAGGCGAC GGCGCAAAGG ATCGACGCGG CGGTCAAGCA GATCGCCGGC
GACATCTTCG CCCGCACCGT GGCGCTGCTG GAGGCCAATC GCGAACTGCT GGAGCAATCC
TCGCGCGAAT TGCTGGAGCG CGAGACGCTG GAGGATGCCG AGCTGCGCGC CTTTGCGGCA
AGGGTGCGGC CGCCGTCCCC GGCCGCCGCC TGA
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| Protein sequence | MEKRTEFHIW YWILAFLAVI LIQDLVSGAR DIAPISYSQF ETYLQQGRIS SVAVGGDRIT
GSFSTPVDGR NQFVTTLVDP AILERIDQAG VEISGVPQNT WLGTLLSWVV PVVLFLALWM
FVFRKFAERQ GLGGFMQVGK SRAKVYMEKE TGVTFADVAG VDEAKAELQE IIAFLRDPEG
YGRLGARIPK GVLLVGPPGT GKTLLARAVA GEAGVTFLSI SGSEFVELFV GVGAARVRDL
FEQARKSAPA IIFIDELDAL GRARNSGQFT GGNDEREQTL NQLLSELDGF DPSSGVVLLA
ATNRPEILDP ALLRAGRFDR QVLVDKPDKK GRIDILRVHM KKVRLAPDVE VEQVAALTPG
FSGADLANLV NEAALLATRR SADSVAMADF NHAVERILAG LEKRNRLLNP REREIVACHE
MGHALVAMAL PGVDVVHKVS IIPRGIGALG YTIQRPTEDR FLMTRDELEN KIAVLLGGRA
AESIVFGHLS TGAADDLVKA TDIARAMVTR YGMDHDLGHV SYDSERPGFL GENEQGSWLS
RRYSEATAQR IDAAVKQIAG DIFARTVALL EANRELLEQS SRELLERETL EDAELRAFAA
RVRPPSPAAA
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