| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4822 |
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| Symbol | |
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| ID | 4583384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 319580 |
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| End bp | 320341 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772126 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_918579 |
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| Protein GI | 119387545 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.237012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.451819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG CCATCGTCAC CGGGGGCTGC CGCGGCATCG GCCTGGCCGC CACCGAGATA
TTCCTGGAAC AGGGCTGGCG CGTCGCCATG GTCGACCGCG ACACCCGGGA ACTGCACCGG
GTCGCGGACG GCATGGAAAA CGTGCTGGCG GTCGAGGCCG ACGTTTCGGA CCCCGACCAG
GTCGAGCGCA TGGTGGCCGA GACCGTCGCC GGCCTCGGCC GCATCGATGC GCTGGTGAAC
AATGCCGGCG TGGCGCTGTT CTCGCATGCC GGGCGCACCA GTTTCGAGGA ATGGCGCGAG
GTGATGGCGA CGAACCTGGA CGGCGTGTTC CTGTGCACCC AGGCCACGGC GCCGGAACTG
GCGAAAACCG GCGGCGCCAT CGTCAACATC GCCTCGATCT CGGGGCTGCG CGCCTCGACC
CTGCGAGTGG CCTATGGCAC CTCGAAGGCG GCGGTGATCC ACCTGACCAA GCAATTCGCC
GCCGAACTGG GCGAACAGGG CATCCGCGTC AATTGCGTCG CCCCCGGCCC GGTCAGGACC
AAGCTGGCCA TGGCGGTGCA TGCGCCCGAG ATCATCTCGG CCTATTACGA CGCCATCCCG
CTGAACCGCT ATGGCGAGGC GCGCGAGATC GCCGAGGCCA TCGTGTTCCT GTGCTCGGAC
AAGGCCAGCT TCGTCTCGGG CCAGACGCTG GCGGTGGATG GAGGCTTCGA CGCCACCGGC
GTCGGCCTGC CGGCGCTGCG GCGCGAGAAC GAGCCGGCCT AG
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| Protein sequence | MKTAIVTGGC RGIGLAATEI FLEQGWRVAM VDRDTRELHR VADGMENVLA VEADVSDPDQ
VERMVAETVA GLGRIDALVN NAGVALFSHA GRTSFEEWRE VMATNLDGVF LCTQATAPEL
AKTGGAIVNI ASISGLRAST LRVAYGTSKA AVIHLTKQFA AELGEQGIRV NCVAPGPVRT
KLAMAVHAPE IISAYYDAIP LNRYGEAREI AEAIVFLCSD KASFVSGQTL AVDGGFDATG
VGLPALRREN EPA
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