Gene Pden_4757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4757 
Symbol 
ID4583260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp252278 
End bp253531 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID639772061 
Product3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) 
Protein accessionYP_918514 
Protein GI119387480 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAC CAGACCCGAA CGAATATCCG CCGCTCAGCC TTGCCGTGCC GGAGCCCGAG 
GTCCGGCCTG GCGGGCAGCC GGATTTCTCG CATGTGGCGA TCCCGCGGGC GGGCACGGTG
CGCCGGCCGC CGGTCGACGT CGATCCCGAA GAGATCCGCG ACCTGGCATT CACCATCATC
CGGGTGCTGA ACCGCGAGGG ACAGGCGGTG GGCCCCTGGG CCGAGGCGCT GGACATCACC
CCCGAGGACC TGCTGGAAGG GCTGCGCCAC ATGATGACGC TGCGCATCTA TGATGCGCGG
ATGCTGAACG CGCAGCGCCA GCAGAAGACC AGCTTCTACA TGCAGCACCT GGGCGAAGAG
GCGATCTCCT GCGCCTTCCA GCGCGCTCTG GCGCCGGGGG ACATGAACTT CCCGACCTAT
CGCCAGGCCG GGCTGCTGAT CGCCGCCGGC TATCCGCTCA GCGCGATGAT GAACCAGATC
TTCTCCAATT CCGAGGACCC GATGCGCGGC CGGCAGCTGC CGGTCTGCTA TTCCTCGCGC
GAGCACGGTT TCTTCACCAT CTCGGGCAAC CTCGCCACCC AGTTCATCCA GGCGGTGGGC
TGGGGGATGG CCTCGGCGAT CTCGGGCGAC CGCAAGATCT CGGCGGCCTG GATCGGCGAC
GGCTCGACGG CGGAAAGCGA TTTCCACGCC GCGCTGGTCT TCGCCTCGAC CTACAAGGCG
CCGGTGGTCT TGAACATCGT CAACAACCAG TGGGCTATCT CGACTTTTCA AGGCATTGCA
CGCGGAGGTT CAGGCACTTT CGCAGCACGC GGGCACGGCT TCGGCATCCC CTCGCTGCGG
GTGGACGGCA ACGACTATCT GGCGGTGCTG GCAGTGGCGA AATGGGCGGC AGAGCGCGCC
CGGCGCAACC TCGGCCCGAC GCTGATCGAA TACGTCACCT ATCGCGCCGG CGGGCATTCG
ACCTCGGACG ACCCCTCGGC CTATCGCCCG GCCGAGGAAA GCACGGCTTG GCCGCTCGGC
GACCCGATCC TGCGGCTCAA GAACCACCTG ATCGCGCTTG GCATCTGGAG CGACGACCGC
CACGCCCAGG CCGAGGCCGA GATCCTGGCC GAGATCACCG AGCAGCAGAA GCGCGCCGAG
GCCATCGGCA CGCTGCACCA CGGCCAGCAC CCCAGCCCGG CCGACATGTT CGAGGATGTC
TATGCCGAGA TGCCGCCGCA TCTTCTGAAG CAACGTCACG AGGCGGGGTT CTGA
 
Protein sequence
METPDPNEYP PLSLAVPEPE VRPGGQPDFS HVAIPRAGTV RRPPVDVDPE EIRDLAFTII 
RVLNREGQAV GPWAEALDIT PEDLLEGLRH MMTLRIYDAR MLNAQRQQKT SFYMQHLGEE
AISCAFQRAL APGDMNFPTY RQAGLLIAAG YPLSAMMNQI FSNSEDPMRG RQLPVCYSSR
EHGFFTISGN LATQFIQAVG WGMASAISGD RKISAAWIGD GSTAESDFHA ALVFASTYKA
PVVLNIVNNQ WAISTFQGIA RGGSGTFAAR GHGFGIPSLR VDGNDYLAVL AVAKWAAERA
RRNLGPTLIE YVTYRAGGHS TSDDPSAYRP AEESTAWPLG DPILRLKNHL IALGIWSDDR
HAQAEAEILA EITEQQKRAE AIGTLHHGQH PSPADMFEDV YAEMPPHLLK QRHEAGF