Gene Pden_4741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4741 
Symbol 
ID4583244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp225816 
End bp227240 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID639772045 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_918498 
Protein GI119387464 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.130107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.303178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC GCGGTTCTCA TTTCGCGCTG CTGACGATCG CAAGCTTCGT CTTGCTGTTC 
GTCTACTCGC TCGTCCAGCT CATCAATATC GACCAGGGTT TCCGCAAGGA GATCGTCGAG
GGCAACCTGT GGGCCGCGAC CCAGGCGGAT CGCGAGGCGC AGAACCTGAT GCTGACCCTT
TATCGCGTCA GCCTGGACCG GGACATCGAT GATGTCCTGC TGCGCTTCGA CATCCTCTAC
AGCCGCATCG CGCTGCTGAC GGACCGGCCG CAGATGGATT ATTTCCGCTC GATCGGCACC
GGCGAGCAGG TCGTTCATGC CAAGGCGCTG CTGGACGAAC TCGACCCGGC CTTTTCCGCC
GAGGATTTCG ATTCCGCGGA TGCCGATGCG CTGATGCCGC GCGTCGCCGA ACTGTCATCG
GTCTTGCGCG AGATCACCAA CGCCTCCGCG CTGAAAGAGA GGATCGACCG GCATGCGCGC
AGGCAGACCC TGCTTCGGGT CATGCAGCTG CTGCTGTTCG CGGTCGGCGG CACGTTCGTG
ACGGGTGTCA TCATGGCCGG CCTGCTTTGG CGGAACATGC GCCGGGCCAT GCGCGCGCAA
GCCGAGTTGC AAAGACACCG CGGGGAGCTG GAAAGGACGG TGGTCGCCCG AACGAGGGAG
CTGCGGGAGG CGCTCGAGGT CGAGCGCCGG GCCAAGGAGG TCTATCGCAG CTTCATCGTG
ACCGTTTCGC ACCAGTTCCG CACGCCCGTC TCGATCATCC ACATGATCGC CCAAAGGCAG
CTGCGCGGCG ACGAGGCGGC GCTTTCCGAA ACGCTCCGCC GCAAGTTCAG CCGCATCCTG
GACGCGGCCG AGCGGCTTGA ACGGCTGCTG AGCAGCTTTC TTGCCTCGGC CAGCGTCGAG
GGCAAGGACA TCACGCTCTC GCGCCGGATC GTGGATTTCA ACGAGATCGT CCGCATCGCT
GCGGACCAGA CCCGGCAGGC CAATCCGGGC CGGCTTCTTG AACTCGGCCT CGCTACCCAG
CGGCTGGAAA CGGACGGCGA TCCCGTGCTG CTGGAACAGG TGGTGCTGAA CCTGCTGTCC
AATGCGATGA AATATTCCGA TGCGCCGTCG CCGGTGCGGT TGGATACGTG GCGGGACGGC
GGCCGGATCT TCTGCCGGGT CACGGATAGC GGCGCGGGCA TCCCCCATGC CGCGCAGGGC
GCGGTCTTCG ACAGGTTCTA TCGTGCGCCG AATGTCCACA GATTGCCGGG GGTCGGGGTT
GGCCTTAGCC TTGTTCGTGA TATTGTCTCG CTGCATGGCG GCGAGGTCAC GTTCACTTCG
CACATGGGTA AGGGGTCCGA GTTCATTGTC GCCGTGCCTG CTACGGGGGA ACACGCCAAT
GAGTCGGGAG CATGCGCCGG CGACCATTCT CTGCGTCGAG GATGA
 
Protein sequence
MRLRGSHFAL LTIASFVLLF VYSLVQLINI DQGFRKEIVE GNLWAATQAD REAQNLMLTL 
YRVSLDRDID DVLLRFDILY SRIALLTDRP QMDYFRSIGT GEQVVHAKAL LDELDPAFSA
EDFDSADADA LMPRVAELSS VLREITNASA LKERIDRHAR RQTLLRVMQL LLFAVGGTFV
TGVIMAGLLW RNMRRAMRAQ AELQRHRGEL ERTVVARTRE LREALEVERR AKEVYRSFIV
TVSHQFRTPV SIIHMIAQRQ LRGDEAALSE TLRRKFSRIL DAAERLERLL SSFLASASVE
GKDITLSRRI VDFNEIVRIA ADQTRQANPG RLLELGLATQ RLETDGDPVL LEQVVLNLLS
NAMKYSDAPS PVRLDTWRDG GRIFCRVTDS GAGIPHAAQG AVFDRFYRAP NVHRLPGVGV
GLSLVRDIVS LHGGEVTFTS HMGKGSEFIV AVPATGEHAN ESGACAGDHS LRRG