Gene Pden_4647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4647 
Symbol 
ID4583150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp135709 
End bp136926 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID639771951 
Productmajor facilitator transporter 
Protein accessionYP_918404 
Protein GI119387370 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG ATCATGGAAG CTTCGGCGAA TTCCGCCGGA ACGGAGTTCT GCTGCTGGCT 
GCGACGCTTG GCAGCGGGGC GGGGCTAAGC TCGCTGCCCT TCTACAGCCT TGGCAGTTTC
ATCGCCCCGC TGGAGGCCGA ATTCGGCTGG AGCCGCGGCG AAGTCGCGTC GTCCTTTCTC
TATACGACGA TGGTTCTTGC GGTGATCGCG CCGTTTCTTG GCAATGTGAT CGACCGGATC
GGAACGCGGC TGGTGGCGCT GGTCTCGATT CCGCTGCTTT CGGCCGTGCT TTACGCGATA
AGCCGCTTCG AGGGCACGAT CGGCCAGTTC CATGCGCTTT ATGCGCTGGC GGCGCTGGCG
GGTGCGGGAA CGACGCCGAT CAACTATACC CGCGCGGTGA ACGGGGCCTT CGACAAGGCA
CGGGGCTTTG CCTTGGGGAT CTCGCAGGCC GGGATCGCGG TGGCCGCCAT CACGCTGCCG
CTGCTGCTGG CCAGCCTGAA CCAGAACTAC AGCTGGCGCA CGGGCTATTT CGTCCTTGCC
TTGCTGGCGT TGGTCCCCTG GCCCTTCGTC CTGTTCGGTT TCGGCAAGCG CCCGGTCCAG
CGCGCCGAAA AGACCGCCGC TACCGCCAAT CGCGGCGAGC TTTTCAAGAA CTGGGTGTTC
TGGGGCGTCG GCATTTCCTT CGCGGCGGTC GCGGTGGCGG TTTCGGCGCT TGTCGTCCAT
ATGGTGCCCC TGCTGCGCGA TGCGGGAATG ACGCCGATCG CGGCTGCCGG CACGGCCTCG
GTCATCGGCT TCGGCGTGCT GGGCGGGCGG CTGATCACGG GCTGGCTGAT CGACCGCTTC
TTTGCCCCCT ATGTTGCCGC GACGCTGTTC CTGGCGACGG CGGGGGGCTG CCTGCTGCTG
CTTTATGGCG GCCCCGGGCT GGTGCCGCTG GCCGCTGCGC TGATCGGCCT GTCGCTGGGC
GCCGAAGCCG ATCTGATCGC CTATCTGACA GCCCGCTATT TCGGCATGGC GCGCTATGCC
TTCGTCTACG GCTTCATCTA TTCGATGTTC CTGGTCGGGA CGGCCTCGGG CCCGGCGCTG
GCGGGCAGGC TCCATGATGC CTCGGGCAAC TACAATTCCA CGATCTGGAC GGTGATCTGC
CTGCTGGTCG TCGGATCGCT GGTGATCCTG CGCCTGCCGC GTTTCGAGAA ATTCGCGTCC
CGCAACCCTG CGCATTGA
 
Protein sequence
MTQDHGSFGE FRRNGVLLLA ATLGSGAGLS SLPFYSLGSF IAPLEAEFGW SRGEVASSFL 
YTTMVLAVIA PFLGNVIDRI GTRLVALVSI PLLSAVLYAI SRFEGTIGQF HALYALAALA
GAGTTPINYT RAVNGAFDKA RGFALGISQA GIAVAAITLP LLLASLNQNY SWRTGYFVLA
LLALVPWPFV LFGFGKRPVQ RAEKTAATAN RGELFKNWVF WGVGISFAAV AVAVSALVVH
MVPLLRDAGM TPIAAAGTAS VIGFGVLGGR LITGWLIDRF FAPYVAATLF LATAGGCLLL
LYGGPGLVPL AAALIGLSLG AEADLIAYLT ARYFGMARYA FVYGFIYSMF LVGTASGPAL
AGRLHDASGN YNSTIWTVIC LLVVGSLVIL RLPRFEKFAS RNPAH