| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4634 |
|---|
| Symbol | |
|---|
| ID | 4583139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 121265 |
|---|
| End bp | 122743 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639771940 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_918393 |
|---|
| Protein GI | 119387359 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00269371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCT GGACACAAAT CGACATTCTG CAATCCGATG AGCCCGCGGC GGAATTCGTT
CTTGCCTTCG CCAGCAAGGA CGGCGCGATA CCCGAACAGG ACGAGGCGCG ACTTTCGCTG
GCGATCCGCC ACGCGGGCTT TGCCGCCCAG CCCGGCCAAT GGCTCGACGT TTCGCCGGCG
AAGGGCACCG ATCCCCGCAT CATCCTGATC GGCGCGCCCG AGATCGGCAC GGCGACGCCG
CATGACTGGG CAAGCCTGGG CGGCAGCATC GTCGAGGCTA TGGCGGCGCT TCGGCTGGAA
GCCGCCCGGC TGTCCGACGG GGCGGCGCTG GCCGACGATG CCCGCCTGTC CGGGGTCCTG
CTGGGGGTTC TGCTGCACGG TTTCCGCCCC GACACCGGGC GCAAGCAGCC CGATCCGACG
CCATGGCCGC AACGCCTGTT GATCCCGCAG GGACGGAACG GCGCGTGCGA CCAGGCGATG
CGCACGGCGC GCGCCGTCAA CCGCGCCCGC GCCTGGGTCG AGGCGCCGGC CAACCGGCTG
ACTCCGCAGG TCTGGGCGGC GGAACTGCCG GCGATCTTCG AGCCGCTGGG CGCGACCTTG
CGGATATTCG ACAGCGGTGC CCTGCAGGAG ATGGGCGCAT CGGCCCTGTT GGCCGTCGGC
CGCGCCTCGG AGTTTCCGCC GCTGCTGGCG GTGGTGGAAT GGCGCGGCGC GCCTGCGCGC
AAAGGTTGGG ATGCGGTGCT GGTCGGCAAG GGCATGACCT TCGACAGCGG GGGGCTGAAC
CTCAAGACCG CGGCACCCGT GATCGCCCGG ATGGGCTTCG ACATGGGCGG TGGGGCCGCC
GTGCTGGGCG CGGTGGAACT GGCGGCATCG CGCAAGGCGG GCTGCAATGT CGCGGCCATC
GTGCCGATGG CCGAGAATGC CATCGACGGG AAAAGCTTTC GACCGGGCGA CGTGATCGAA
TCCCTGGGCG GCCTGACCAT CGAGATCCGC AATACCGATG GCGAGGGGCG GCTGGTCCTG
GCCGACGGCA TCGCCTATGG GTTGCAGACC TACCGGCCTG CCCATGTCAT CGACATCGCC
ACGCTGACCG GCATGATCGC CGTGGCGTTG CTGGAGGAAT TCGCCGGGCT CTATTCCAAC
GACGATGCGC TTGCCGCCGA ACTCGACGAA GCGGGTCGGG CAACGGGAGA GTTTTTGTGG
CGCATGCCCT GCCAGTCCAA CCAGGACCAT GTGGTCGAGA CCCCGGTTGC GGACGTGGCC
AACATGAGCA CCTTTCCGGG GCTGCTGGGC ACCGGCCTGT CCGCGCCGGT TTCCGGGCCG
AAGCTCTTGC AGAAATTCGT GGGCGATACC CCCTGGGCGC ATATCGACAT CGCCGGCACC
GTCTGGGCCA CGCGCCGCTC GGCCTATGGC GGCAATAACG CCACCGGCTA CGGGGTCCGC
CTGCTGGACC AGTGGCTGCG CCGTTTCGAA AGAGGGTGA
|
|---|
| Protein sequence | MTAWTQIDIL QSDEPAAEFV LAFASKDGAI PEQDEARLSL AIRHAGFAAQ PGQWLDVSPA
KGTDPRIILI GAPEIGTATP HDWASLGGSI VEAMAALRLE AARLSDGAAL ADDARLSGVL
LGVLLHGFRP DTGRKQPDPT PWPQRLLIPQ GRNGACDQAM RTARAVNRAR AWVEAPANRL
TPQVWAAELP AIFEPLGATL RIFDSGALQE MGASALLAVG RASEFPPLLA VVEWRGAPAR
KGWDAVLVGK GMTFDSGGLN LKTAAPVIAR MGFDMGGGAA VLGAVELAAS RKAGCNVAAI
VPMAENAIDG KSFRPGDVIE SLGGLTIEIR NTDGEGRLVL ADGIAYGLQT YRPAHVIDIA
TLTGMIAVAL LEEFAGLYSN DDALAAELDE AGRATGEFLW RMPCQSNQDH VVETPVADVA
NMSTFPGLLG TGLSAPVSGP KLLQKFVGDT PWAHIDIAGT VWATRRSAYG GNNATGYGVR
LLDQWLRRFE RG
|
|---|
| |