Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4612 |
Symbol | |
ID | 4583117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 98287 |
End bp | 99021 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771918 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_918371 |
Protein GI | 119387337 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGAA CAATACTTGC CGGAGCCTTT GCGGCCGCTC TTGTCGCCGC GCCGGTGCAG GCGCAGGACA ACGTCCGGGA CATCGTGGGT GGGATCGCCC GCGAGTATCT GCAACAGGAA CAGGACCGTG CCGCCTTCTC ACAGGCGCAG AATACCAACA CGCTCTCGGC CTATCAGTCC TATTTGCGGC AGTTCCCGAA CGGGATGTAT GCCGCACAGG CGCGTGATCG CGTGGAACGG CTGGGTGGGG CGACGTCCCG TCCCGAGACC CCGAGCGCCG CGGATACGGC TTCGCTGACG GCCCAGCAGC GCCTTGAGAT CCAGCGCCGC CTGAATGCAT TGGGATATGA GACCAACGGC GTCGACGGAA GCTTCGGACC GGGGACTCGC CGCGCCATCG CGCTGTGGCA GCGGGACCGC AACTATTCGC AGACCGGCGC GCTGAACGCG GCCCAGGCGA ACGAGATCCT GCGGGGAACG ACCAGCGGCA GCCGCACCGA CAGCGCGGAT TCCGCCAGAG GTCCGGCGCA GGTCGAGGCG GCGCTGAACC TCAGCCGCCA GCAGCGCAGC GCGGTGCAGG CGGGATTGAC GCGGCGCGGC TTCGACACTC GCGGTGTGGA CGGGGTGTTC GGGCAAGGCA CCCGCAACGC CATCGCGGCG TGGCAACGGG CCAACGACGA ATCCGTCACC GGCTACCTGA CCGGAGCACA GGCGGAACGG CTGATCGCCC GCTGA
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Protein sequence | MVRTILAGAF AAALVAAPVQ AQDNVRDIVG GIAREYLQQE QDRAAFSQAQ NTNTLSAYQS YLRQFPNGMY AAQARDRVER LGGATSRPET PSAADTASLT AQQRLEIQRR LNALGYETNG VDGSFGPGTR RAIALWQRDR NYSQTGALNA AQANEILRGT TSGSRTDSAD SARGPAQVEA ALNLSRQQRS AVQAGLTRRG FDTRGVDGVF GQGTRNAIAA WQRANDESVT GYLTGAQAER LIAR
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