| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_r2 |
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| Symbol | |
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| ID | 4794290 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 144166 |
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| End bp | 146983 |
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| Gene Length | 2818 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640721055 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00999234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.528087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATAAGGGCGT TTGGTGGATG CCTTGGCAGC AAGAGGCGAT GAAGGACGTG ATACTCTGCG
ATAAGCCATG GGGAGCTGAG AATAAGCTTT GATCCATGGA TCTCCGAATG GGGAAACCCA
CCTGAAATCC AGTTGTTGTT ACCCTCGGGT ATCAACAACC GGGTTAACCA GGTACTTATC
ACCTGAATAC ATAGGGTTTT AAGAGCGAAC CCGGGGAACT GAAACATCTA AGTACCCGGA
GGAAAGGAAA TCAACAGATA CTCCCCCAGT AGCGGCGAGC GAACGGGGAC CAGCCGAGCC
GTGAGAATGA CCAGAATGGC CTGGAAAGGC CAGCCATAGC GGGTGACAGC CCCGTATGGG
AAGTTTGATC GGACGCATTA AGTAGGGCGG GACACGTGAA ATCCTGTCTG AAGATCGGGG
GACCACCCTC GAAGGCTAAG TACTCCTTGC TGACCGATAG CGAACCAGTA CCGTGAGGGA
AAGGTGAAAA GCACCCCGAC GAGGGGAGTG AAACAGTTTC TGAAACCGGA CGCCTACAAG
CAGTCGGAGG GGCCTTGCGC CCTGACGGCG TACCTTTTGT ATAATGGGTC AACGACTTGG
TCTGTCTGGC AAGCTTAAGC CGTTAGGTGT AGGCGCAGCG AAAGCGAGTC TTAAAAGGGC
GCATGAGTCA GACGGATCAG ACCCGAAACC AGATGATCTA GGCATGAGCA GGCTGAAGGT
TGGGTAACAC CAACTGGAGG GCCGAACCCA CACCTGTTGA AAAAGGTCGG GATGACTTGT
GCCTAGGGGT GAAAGGCCAA TCAAATCTGG AGATAGCTGG TTCTCCGCGA AAGCTATTTA
GGTAGCGCGT CAGACGAATT CTCCCGGGGG TAGAGCACTG CATGGATGAT GGGGGCCCAC
AGCCTTACTG AGTCTAAGCA AACTCCGAAT ACCGGGAAGA ACTATCTGGC AGACACACGG
CGGGTGCTAA CGTCCGTCGT GGAGAGGGAA ACAACCCTGA CCAACAGCTA AGGCCCCCAA
TTCGTGGCTA AGTGGGAAAG CATGTGAGAC TTCCAAAACA ACCAGGAGGT TGGCTTAGAA
GCAGCCATCC TTTAAAGATA GCGTAACAGC TCACTGGTCT AATCAAGAGG TCTTGCGGCG
AAGATGTAAC GGGGCTCAAG CCACGAGCCG AAGCTTTGGG TGTGCATTTA TGCACGCGGT
AGCGGAGCGT TCTGTGATAT AGAACGCTGC CTCCTTAGTA TCCTCGGGTA TATTGGAGGC
AATGTTCTGA CTGTGAAGCC GGGCTGTAAG GCATCCGGTG GAGTGATCAG AAGCGAGAAT
GTTGACATGA GTAGCGACAA ACAGGGTGAG AGACCCTGTC GCCGAAAGTC CAAGGGTTCC
TGCTTAAAGC TAATCTGAGC AGGGTAAGCC GGCCCCTAAG GCGAGGCCGA AAGGCGTAGT
CGATGGGAAC CAGGTTAATA TTCCTGGGCC AGGAGATGGT GACGGATCGC AGGTGTAGTT
CCTCCTTATC GGATTGGAGG GGCTGCTGAG CGGTTCCTGG AAATAGCCCT CCACAAGACC
GTACCCTAAA CCGACACAGG TGGACTGGTA GAGAATACCA AGGCGCTTGA GAGAACCACA
TTTAAGGAAC TCGGCAAAAT ACCTCCGTAA GTTCGCGAGA AGGAGGCCCC GTTGGCAGGC
AACTGTCGGC GGGGGGCACA AACCAGGGGG TGGCGACTGT TTACTAAAAA CACAGGGCTC
TGCGAAGCCG TAAGGCGACG TATAGGGTCT GACGCCTGCC CGGTGCCGGA AGGTTAAAAG
GAGAGGTGCA AGCCTTGAAT TGAAGCCCCG GTAAACGGCG GCCGTAACTA TAACGGTCCT
AAGGTAGCGA AATTCCTTGT CGGGTAAGTT CCGACCTGCA CGAATGGCGT AACGACTTCC
CCGCTGTCTC AAATGTGGAC TCAGCGAAAT TGAATTGTCT GTGAAGATGC AGACTTCCCG
CGGTTAGACG GAAAGACCCC ATGCACCTTT ACTATAGCTT CGCACTGGCA TCAGGATTGC
GATGTGCAGG ATAGGTGGTA GGCGCTGAAA CGGGGACGCC AGTTCCCGTG GAGCCATCCT
TGAGATACCA CCCTTCGCAC TCTTGATGTC TAACCGCGGC CCGTTATCCG GGTCCGGGAC
CCTGCGTGGT GGGTAGTTTG ACTGGGGCGG TCGCCTCCCA AAGAGTAACG GAGGCGCGCG
AAGGTTGGCT CAGAGCGGTC GGAAATCGCT CGTCGAGTGC AATGGCAGAA GCCAGCCTGA
CTGCAAGACT GACAAGTCGA GCAGAGACGA AAGTCGGCCA TAGTGATCCG GTGGTCCCGA
GTGGAAGGGC CATCGCTCAA CGGATAAAAG GTACGCTGGG GATAACAGGC TGATGATGCC
CAAGAGTCCA TATCGACGGC ATCGTTTGGC ACCTCGATGT CGGCTCATCT CATCCTGGGG
CTGGAGCAGG TCCCAAGGGT ATGGCTGTTC GCCATTTAAA GAGGTACGTG AGCTGGGTTT
AGAACGTCGT GAGACAGTTC GGTCCCTATC TGCCGTGGGT GTAGGATACT TGAGAGGAGT
TGCCCCTAGT ACGAGAGGAC CGGGGTGAAC GTTCCACTGG TGGACCAGTT ATCGTGCCAA
CGGTAGTGCT GGGTAGCTAT GAACGGACAG GATAAACGCT GAAGGCATCT AAGCGTGAAG
CCCCCCTCAA AACAAGGTAT CCCTTGAGAG CCGTGGAAGA CCACCACGTC GATAGGCCGG
AGATGTAAGC GCAGCAATGC GTTCAGTTGA CCGGTACTAA TCGCTCGATT GGCTTGAT
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| Protein sequence | |
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