Gene Pden_4480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4480 
Symbol 
ID4583030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1694494 
End bp1695639 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID639771787 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_918240 
Protein GI119387185 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.155011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG CGCTGAGCGA AGAGCAGCAG GCGATATTCG ATCTGGCCCG GGATTTCGGG 
ACGGCGGAAA TCGCGCCCCA AGCCCGCGCC TGGGAAGAGG CGGGCACCAT TCCGCGCGAA
CTGTGGCAAA AGGCCGCCGA GCTGGGTTTC GGCGGCGTCT ATGTCGGCGA GGAACACGGC
GGCACCGGGC TTTCGCGCCT GGACGCGACG CTGGTCTTCG AGGCGCTGGC CATGGCCTGC
CCCTCGGTCG GCTCGTTCCT GTCGATCCAC AACATGTGCG GCGGCATGAT CGACAAGTTC
GGCACCGACG CGAACAAGGC GCGCTGGCTG CCCGGCCTGT GCAGCATGGA AAAGGTGTTC
TCCTATTGCC TGACCGAGCC GGGCTCGGGC TCGGACGCCG CCGCGCTGCG CACGCGGGCC
GAGCGGGTCG AGGGCGGCTG GAAGCTGAAC GGCACCAAGG CCTTCATCTC GGGCGGCAGC
TATTCGGATT GCTATCTGGT CATGGTCCGC ACCGGGCAGG ACGGGCCGCG CGGCATCTCG
ACCATGGTGG TCGAGGCCGG CACGCCCGGC CTCAGCTTCG GCGCGCTCGA GCACAAGATG
GGCTGGAAGG CGCAGCCGAC CGCCCAGGTG CAGTTCGACG ATTGCGTGAT CCCCGAGGAA
AACCTGATCG GCGAGGAAGG CCGGGGCTTC GCCTATGCCA TGGCGGGCTT GGACGGCGGG
CGGCTGAACA TCTCGGCCGG TGCGCTTGGC GGCGCGCAGG CGGCGCTGGA CGCGACGCTG
CGCTACATGG GCGAGCGTCG CGCCTTTGGC CAGACGCTGG ACCAGTTCCA GGCGCTGCAA
TTCCGCCTGG CCGAGATGGA GACGGCGCTG CAATCCTCGC GCATCTTCCT GCGCCAGGCG
GCATGGAAGC TGGACCGGGG CGACCGCGAC GCCAGCAAGT TCTGCGCCAT GGCCAAGCTG
CATGTGACCG ACCGCGCCTT CGAGGTCGCC AATCAGTGCC TGCAATTGCA TGGCGGTTAC
GGCTATCTTG CCGATTACGG GATCGAAAAG ATCGTGCGCG ACCTGCGCGT GCACCAGATC
CTGGAAGGCA CCAATGAAAT CATGCGGCTG ATCGTCGGCC GCGGCCTGCT GGCGGAGCGT
GACTGA
 
Protein sequence
MDFALSEEQQ AIFDLARDFG TAEIAPQARA WEEAGTIPRE LWQKAAELGF GGVYVGEEHG 
GTGLSRLDAT LVFEALAMAC PSVGSFLSIH NMCGGMIDKF GTDANKARWL PGLCSMEKVF
SYCLTEPGSG SDAAALRTRA ERVEGGWKLN GTKAFISGGS YSDCYLVMVR TGQDGPRGIS
TMVVEAGTPG LSFGALEHKM GWKAQPTAQV QFDDCVIPEE NLIGEEGRGF AYAMAGLDGG
RLNISAGALG GAQAALDATL RYMGERRAFG QTLDQFQALQ FRLAEMETAL QSSRIFLRQA
AWKLDRGDRD ASKFCAMAKL HVTDRAFEVA NQCLQLHGGY GYLADYGIEK IVRDLRVHQI
LEGTNEIMRL IVGRGLLAER D