Gene Pden_4467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4467 
Symbol 
ID4583017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1681035 
End bp1682078 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID639771774 
Productdihydroorotase 
Protein accessionYP_918227 
Protein GI119387172 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.506295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT CCGTGACGCT CCGACGCCCC GACGACTGGC ACCTGCACCT GCGCGATGGC 
GCCATGCTGC AGGCAGTGGC TTCATTTTCC GGCCATTTTG GCCGGGCGAT CATCATGCCG
AACCTGGTGC CGCCCGTGGT GACGGGGGCG CAGGCGGCCG CCTATCGCGA CCGGATCCGG
GCCGCGCTGG GTCCGAAAGT GACGTTGCGT CCATTGATGA CGCTCTACCT GACCGAAACC
ACCGATCCGG CCGATGTGGT GGCCGCCCAT GCCGGGGGAA TCATCTCGGC CGTCAAGCTT
TATCCGGCCG GGGCGACCAC CAATTCGGCC TCGGGCGTGC GCGACTTCGA CAAGGTGCGA
GGCGTGCTGG AAGCCATGGC CGAAGCCGGC ATCCCGCTGC TCTTCCATGG CGAGGTCACC
GATCCGGCGG TGGACATCTT CGACCGCGAG GCGGCGTTCA TCGACCGCGT GCTGGACCCG
ATCCGCCGCG CCACGCCCGG CCTGCGCGTG GTGATGGAAC ATATCACCAC GTCGGACGGC
GTGGATTATG TCGCCGCCAA CGACGATATC GGCGCGACCA TCACCACCCA CCACCTGGTC
ATCAACCGCA ACCACATCCT GGCGGGCGGC ATCCGGCCGC ATTACTACTG CCTGCCGGTC
GCCAAGCGCG AAACCCACCG GCTGGCGCTG CGCAAAGCGG CGGTCTCGGG CGATGGGCGC
TTCTTCCTCG GCACCGACTC GGCGCCGCAT CCCGACCGCG CCAAGGAAGC GGCCTGCGGC
TGCGCCGGCT GCTTCACCGC GCCGAACACC ATGTCCATCC TGGCGCAGGT CTTCGAGGAG
GAAGGCGCGC TCGACCGGCT CGAAGGCTTC GCCTCGCTCA ACGGCGCCGC CTTCTACGGC
ATGGAGCCGA ACCAGGACCG CATCCGGCTG GTCCGGCGCG ACACGCCCGC CGAATATCCG
ACCCATATCG CCGCCGGCGA CGAAACCGTC ACCGTCTTCG ACCCCGGCTT CCCGCTCTAC
TGGCACGTTG AGGACCCCGC ATGA
 
Protein sequence
MTKSVTLRRP DDWHLHLRDG AMLQAVASFS GHFGRAIIMP NLVPPVVTGA QAAAYRDRIR 
AALGPKVTLR PLMTLYLTET TDPADVVAAH AGGIISAVKL YPAGATTNSA SGVRDFDKVR
GVLEAMAEAG IPLLFHGEVT DPAVDIFDRE AAFIDRVLDP IRRATPGLRV VMEHITTSDG
VDYVAANDDI GATITTHHLV INRNHILAGG IRPHYYCLPV AKRETHRLAL RKAAVSGDGR
FFLGTDSAPH PDRAKEAACG CAGCFTAPNT MSILAQVFEE EGALDRLEGF ASLNGAAFYG
MEPNQDRIRL VRRDTPAEYP THIAAGDETV TVFDPGFPLY WHVEDPA