Gene Pden_4457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4457 
Symbol 
ID4583007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1668345 
End bp1669181 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID639771764 
Productpyridoxal kinase 
Protein accessionYP_918217 
Protein GI119387162 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.326884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC CGCTGGTGAT CTCGATCCAG AGCCAGGTGG TCATGGGTCA TGTCGGCAAT 
TCGGCGGCGG TGTTCCCGAT GCTGGCAGCA GGGCTGGAGG TGGCGCCGAT CCCGACGGTG
ATCTTTTCCA ATACCCCCGA TTATCCGACC CTGCGCGGCC GGCCGCTGCC GGGCGATTTC
TTTGCCGAGC TGTTGCTGGG CGCCTGGGAC CGCGGGTTGC CGGAACGCGC GGATTTCCTG
CTGACCGGCT ATATCGGCTC GGTCGAGGTG GCACAGCTGA CGGCCGATTT CGTCGCCCGC
GCCAAGGCGG CGAACCCGCG CCTGCGCTAT TACTGCGATC CGGTGCTGGG CGACGAGCAG
CCGGGGCTTT ATGTGCCGCA GGAGATCGCC GACACCTTCC GCGACCGGCT GCTGCCCATG
GCCGACATCG CCTCGCCCAA CCCGTTCGAG GTCGCCTGGC TGACCGGCCA GCCCATCGCG
GAGCTGGCCG ATGTCCACCG CGCCGCGCTG GCCCTGCGCA TGGCGCCCGA GGCGCAGCTG
ATCGTCACCG GCTGCAAGCT GCGCGAGACG GCGCCCGGGA TGCTGGAAAG CGTGATCCTG
GGGCCGCAGG GGCTGACGCG GCACCCGACA CCGCACCTGC CGGTGGCGCT GGCCGGGACC
GGGGATCTGT TCGCAGGGCT GATCGCCGCC GCGCTTGGCC AGGGGCGCGG CCTTGCCCAG
GCGGTCGAAT TCGCGCAGGT CCAGACCTCG CGCGCGCTGC GGCGGGCGGC GGAGCTGGGC
ACCAAGGAGG TGGTGCTTTC GGATCCCGAG TTCCGCGCGG CGCTGCTGGT GCCCTGA
 
Protein sequence
MTRPLVISIQ SQVVMGHVGN SAAVFPMLAA GLEVAPIPTV IFSNTPDYPT LRGRPLPGDF 
FAELLLGAWD RGLPERADFL LTGYIGSVEV AQLTADFVAR AKAANPRLRY YCDPVLGDEQ
PGLYVPQEIA DTFRDRLLPM ADIASPNPFE VAWLTGQPIA ELADVHRAAL ALRMAPEAQL
IVTGCKLRET APGMLESVIL GPQGLTRHPT PHLPVALAGT GDLFAGLIAA ALGQGRGLAQ
AVEFAQVQTS RALRRAAELG TKEVVLSDPE FRAALLVP