Gene Pden_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4439 
Symbol 
ID4582989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1647221 
End bp1648222 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID639771746 
ProductABC transporter related 
Protein accessionYP_918199 
Protein GI119387144 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0195171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TCGAGTTGAA GAACGTCACC AAGTCCTATG GCGGCTTGCA GGTCATCAAG 
GGCATCGACC TGGAGATCCG CAAGGGCGAG TTCATGGTCT TTGTCGGCCC GTCCGGCTGC
GGCAAGTCCA CGCTGTTGCG GCTGGTCTCG GGGCTGGAGG AGATCACCAC CGGCGACATG
CTGTTCGACG GGCAGCGGGT GAACGACCTG GTGCCCTCGG ACCGCGGCAT CGCCATGGTG
TTCCAGAGCT ATGCGCTTTA CCCGCATATG AAGGTCTATG ACAACATGGC CTTCGGCATG
AAGCTGGCCA AGGCCGGCAA ACCCGAGATC GACCGCCGCG TGCGCGAGGC GGCGCGGCTG
TTGCAGATCG AGCATCTGCT GGACCGCCTG CCCAAGCAAC TGTCCGGCGG CCAGCGCCAG
CGCGTCGCCA TCGGCCGCGC CATCGTGCGC GACCCGCGCG TCTTTCTGTT CGACGAGCCG
CTGTCGAACC TCGACGCGGC GCTGCGCGTG CAGACGCGGC TGGAGATCGC CCGGCTGCAT
CACGGCATGC AGGACGTGAC GATGATCTAC GTCACCCATG ACCAGGTCGA GGCGATGACG
CTGGCCGACC GCATCGCCGT GCTGCGCGAC GGCAAGCTGG AGCAGGTCGG CACGCCGGCC
GAGCTTTACG AGCGGCCGAA CTCCACCTTC GTCGCCGGGT TCATCGGCAG TCCCAAGATG
AACTTCCTGA CCGACGGTTT CGCCCATGCG CATGACTGCG CGACCCTGGG CATCCGGCCC
GAGCATATCG ACATCGCCGA GGCCGGCCCG TGGTCGGGCG AGGTCGTCCA TGCCGAGGAT
CTGGGCGCCG ATCATTACCT CTTCGTCGAG ATCGGCGCGG CCGAGCCGCT GGTCGTGCGC
CAGCCGGGCA AGCTGGCCCT GCCGCTGGGC ACGCGGCTGA GCCTCGCGCC GCGCCTGGGC
CACCTGCACC GTTTCGACGC CAACGACGCG CCGATCCGCT GA
 
Protein sequence
MAKIELKNVT KSYGGLQVIK GIDLEIRKGE FMVFVGPSGC GKSTLLRLVS GLEEITTGDM 
LFDGQRVNDL VPSDRGIAMV FQSYALYPHM KVYDNMAFGM KLAKAGKPEI DRRVREAARL
LQIEHLLDRL PKQLSGGQRQ RVAIGRAIVR DPRVFLFDEP LSNLDAALRV QTRLEIARLH
HGMQDVTMIY VTHDQVEAMT LADRIAVLRD GKLEQVGTPA ELYERPNSTF VAGFIGSPKM
NFLTDGFAHA HDCATLGIRP EHIDIAEAGP WSGEVVHAED LGADHYLFVE IGAAEPLVVR
QPGKLALPLG TRLSLAPRLG HLHRFDANDA PIR