| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4408 |
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| Symbol | |
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| ID | 4582958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1606211 |
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| End bp | 1608346 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771715 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_918168 |
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| Protein GI | 119387113 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.401653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCCG CCATGAAACA CCAATATCGC CTTGGCATCG ACGCCGGCGG CACCTTCACC
GACTTCATCC TCGCCGACCG CGAGGGCGCC CTGCGCATCT TCAAGGCGCT CTCGACCCCG
CAGGACCCGA CGCTGGCCAT CAGGAACGGC CTTGCGCTGA TCGAGGAAGA GACGGGCATC
ACCCCGCGCG ATCTGGTCTC GAACGCCGAT CTCTGCATCA ACGGCACCAC GGTGGGGCTG
AACGCGCTGA TCACCCATAC CGGCGCCAAG ACCGGCCTGA TCGCCACCAG GGGGCACGAG
GACAGCATCG AGATCCGTCT CGGCCACAAG GAGGACGGCT ATCGCTACGA CCCGGACTAT
CCGCCCGCGA CCATGCTGGT GCCGCGCCAT CTGCGGTGCG GGGTCGGCGA AAGGGTGATC
TCGACCGGCG CCGTCCACAC CCCGCTGAAC GAGGAGGAGG TGCGCGAAGC CTGCCGGCAT
TTCCTGCGCG AGGGCGTCGA ATCGGTCGCG ATCAGCTTCG TCTGGTCGGT CCTGCACCCC
GATCACGAGC TGCGCGCCGC CCAGATCGTG CGCGAGATGA TGCCGGATGT GCGCCTGACC
GTCGGCAGCC AGCTCTATCC GCAGGTGCGC GAATACACCC GCACCTCGAC CGCCATCGTG
AATGCCTATC TGGCGCCGAT CCTGTCGCGC TACGTGCAGG CGGTGGACGG CTATTTCCAA
AGCCTCGGCG CGCGCCAGCC GGTGCGCTAT TTCCAGTCGA ACGGCGGGCT GGCGCTGGGG
TCGGTGGTCT CGGACCAGTC GGTCTATGCG ATCAATTCCG GCCCCGCCTC GGCGCCCAGG
GCGGCGCTTT ATCTGGGCGA GCCCTACGGC CTTGAGGACA TCATCACGGT CGACATGGGC
GGCACCAGCT TCGACATCAC CCTGACCCGC GAGGGCCAGG CCAACGTGTC GAAGAACATC
GACTTCCTGC GCTATCGCAT CGGCATCCCG ATGATCCAGG TGGAAACCCT GGGCGCGGGC
GGCGGCTCGA TCGGCTGGAT CGACTCGATG GGGCTGATGC AGATGGGGCC GCAATCGGCG
GGCTCGGAAC CCGGCCCGGC CTGCTACGGC AAGGGCGGCG AGCGGCCGAC GACGACCGAC
GCGAACCTGG TGCTGGGCTA CCTGAACCCC GAGGGCCTGG TCGGCGGCCG CCTGCCGCTC
GGCGTGGAAA AGGCGCGCGA GGCGATCCGC AAGCACCTGG CCGAGCCCCT GGGCATCAGC
GTCGAGACGG CGGCCTACGG CATGTTCACC ATCGTCAACA ACAACATGGT GAACGCGATC
CGCCGCGTCT CGGTCGAGCG CGGCTACGAT CCGCGCGACT TCGTGCTGAA CTGCGCCGGT
GGCGCCACGG GCGCGCATAT CACCGCGCTG GCGCGCGAGA TGGGCATCGG CAAGGTGCTG
GTCTCCAAGC TCGCGTCGGG GCTTTGCGCC TTCGGTCAGA TCATCTCGGA CGTGAAATAC
AACTACATGG CCCCCATCGC CGCGCGGCTG GAAGGGGCCG AGGCGGCCAG GCGGCTGGAC
GAGACATTCG CCCGGCTGGA GGACAGGGGC CGCGCCGACC TGATGGCCGA CGATTTCGCC
CCCGACCGGA TCGGCATTCG CCGCAGCCTC GACATGCGCT ATGTCGGGCA AGTGCATGAA
TGCACGGTCA GCGTCGATCC CTTCGCCATC GACGAGGCGG CGCTGGAACG CCTCAAGGCC
GCCTTCCACG CCCGCCACGA AGAGCTTTAC ACCTATGCCG AGCCGCACAG CCCGGTCGAG
GTGGTGAACG TGGAAAGCGC CATCTCGGGC GCGGTCGAGC GTCCGGCGCG GATGCGGATC
GCGTCGGGGC ACGGCGCGCA TGCGGCGCTG TCGGGCACGC GCGAGATGAT CTTCGACGCC
TCGGGCCGCA AGCACGAAAC CCCGGTCTAT GACGGCGCGA AGCTGGGCGC GGGCGACGTC
GTCACCGGCC CGGCGGTCAT CCAGGAAGTG ACGACCACCA TCGTCATCGA GCCGGGCTGG
GTCGCCGAAC TGGACGGCAA CGGCGTCTAT GTCGTGACCG TGGCAAGCGG CGCGGCCGGG
ACGCAAGGAC AGGCCAAGGT GCTGGCCGAG GCCTGA
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| Protein sequence | MEPAMKHQYR LGIDAGGTFT DFILADREGA LRIFKALSTP QDPTLAIRNG LALIEEETGI
TPRDLVSNAD LCINGTTVGL NALITHTGAK TGLIATRGHE DSIEIRLGHK EDGYRYDPDY
PPATMLVPRH LRCGVGERVI STGAVHTPLN EEEVREACRH FLREGVESVA ISFVWSVLHP
DHELRAAQIV REMMPDVRLT VGSQLYPQVR EYTRTSTAIV NAYLAPILSR YVQAVDGYFQ
SLGARQPVRY FQSNGGLALG SVVSDQSVYA INSGPASAPR AALYLGEPYG LEDIITVDMG
GTSFDITLTR EGQANVSKNI DFLRYRIGIP MIQVETLGAG GGSIGWIDSM GLMQMGPQSA
GSEPGPACYG KGGERPTTTD ANLVLGYLNP EGLVGGRLPL GVEKAREAIR KHLAEPLGIS
VETAAYGMFT IVNNNMVNAI RRVSVERGYD PRDFVLNCAG GATGAHITAL AREMGIGKVL
VSKLASGLCA FGQIISDVKY NYMAPIAARL EGAEAARRLD ETFARLEDRG RADLMADDFA
PDRIGIRRSL DMRYVGQVHE CTVSVDPFAI DEAALERLKA AFHARHEELY TYAEPHSPVE
VVNVESAISG AVERPARMRI ASGHGAHAAL SGTREMIFDA SGRKHETPVY DGAKLGAGDV
VTGPAVIQEV TTTIVIEPGW VAELDGNGVY VVTVASGAAG TQGQAKVLAE A
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