Gene Pden_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4401 
Symbol 
ID4582951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1597278 
End bp1598243 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID639771708 
Producthypothetical protein 
Protein accessionYP_918161 
Protein GI119387106 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0268815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAT CCATCACCCG CCGCCTGCTG CTGGGCGCCG CCATGGCGCT TGGCCTCGCA 
GGTGCCGCCG CCGCCGAATA CCCCGAGCGT CCGATCACCC TGGTGATCCC CTTTGCCGCC
GGCGGCTCGA CCGACGTGGT CGGCCGCATC GTCGCCGACC GCATGAGCCA GGAACTGGGC
CAGCAGGTCA TCGTGCAGAA CGTCGGCGGC GCCGGCGGCA GCCTGGGCGC GGCCCAGGTC
GCCAAGGCCG ACCCGGACGG CTATACGATC CTGATGGCGA CCGTCGCCAC CCATGCGCTG
AACCCGCTGA TCCTGAAGCA GAAACCCTAT GATCCGGTCG AGGATTTCGC GCCGGTCTCG
CTTCTGGTGC TGGTGCCGAA CGTGCTGGCT GTGAACCCGG AACTGCCGGT CAACACCGTG
CAGGAGCTGA TCGACCTGTC CAAGTCCGAG CCGCTGGCCT ATGCCTCGTC CGGCAACGGC
ACGCCGCTGC ACCTGTCGGG CGAGCTGTTC AAGGCCATGG CCGGGATCGA CCTGACCCAT
ATCCCCTACA AGGGCTCGGG GCCGGCGCTG ACCGACGTGC TGGGCAACCA GGTGCCGATC
ATCTTCGACA ACCTGCCCTC GGCCTCGGGC CATATCGCCT CGGGCAAACT GCGGGCGCTT
GGCGTGACCA CGGCGGAGCG CGCGCCCAGC TTCCCCGACG TTCCGGCCAT CGCCGAGACC
CTGCCGGGAT ACGAGACCTA TACCTGGAAC GCGCTTTTCG CCCCGGCAGG CACGCCGCCC
GAGGCCATCG AGGCGCTGAA CAAGGCCGCG CTGACCGCCA TGGCCGACCC GGCGGTGGCC
GACCGGATGA AGGAGTTTTC CGCCACCGTC GTCGCCTCGA CGCCCGAGGA ACTGGCCGAG
CACGTCAAGG CCGAGATGGC GAAATGGGAG CCGGTGGTGC GCGACGCAAA CGTCAGCCTG
GACTGA
 
Protein sequence
MTASITRRLL LGAAMALGLA GAAAAEYPER PITLVIPFAA GGSTDVVGRI VADRMSQELG 
QQVIVQNVGG AGGSLGAAQV AKADPDGYTI LMATVATHAL NPLILKQKPY DPVEDFAPVS
LLVLVPNVLA VNPELPVNTV QELIDLSKSE PLAYASSGNG TPLHLSGELF KAMAGIDLTH
IPYKGSGPAL TDVLGNQVPI IFDNLPSASG HIASGKLRAL GVTTAERAPS FPDVPAIAET
LPGYETYTWN ALFAPAGTPP EAIEALNKAA LTAMADPAVA DRMKEFSATV VASTPEELAE
HVKAEMAKWE PVVRDANVSL D