| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4387 |
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| Symbol | |
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| ID | 4582937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1581285 |
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| End bp | 1583006 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771694 |
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| Product | ABC sugar (glycerol) transporter, periplasmic binding protein |
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| Protein accession | YP_918147 |
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| Protein GI | 119387092 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.136814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGA TGCAAAGGAC CACGGCCATG GCGCTTGCGC TTCTGGTCAT GGAGGCGCCC
GCATGGGCGG ACATGGAGGC GGCGAAGAGG TTCCTCGACG CCGAGATCGG CGATCTGTCC
TCGCTCTCGC GCGAGGATCA GGAAAAGGAG ATGCAGTGGT TCGTCGATGC CGCGCAGCCG
CTGGCGGGGA TGGAGATCAA GGTGGTCTCG GAGACCATCA CCACGCATGA ATACGAGGCC
AAGGTGCTGG CGCCCGCCTT TACCGCCATC ACCGGCATCA AGGTCACCCA CGACCTGATC
GGCGAGGGCG ACGTGGTCGA GAAGCTGCAG ACCCAGATGC AGACCGGCGA GAACATCTAT
GACGCCTATG TCAACGACAG CGACCTGATC GGCACGCATT GGCGCTATCA GCAGGCCCGC
AGCCTGACCA AGTGGATGGA AGAGGAAGGC AAGGACTTCA CCAGCCCGAC GCTGGACCTC
GGCGATTTCA TCGGGCTGGA GTTCACCACC GCGCCGGATG GCGACCTCTA CCAGCTGCCC
GACCAGCAAT TCGCCAACCT CTACTGGTTC CGCTACGACT GGTTCAGCGA CGCGAAGACG
CAGGAGGATT TCAAGGCCAA ATACGGCTAC GACCTGGGCG TGCCGGTCAA CTGGTCGGCC
TATGAGGACA TCGCCGAATT CTTCACCGGC CGCGACATGT CCTATATCGC GGGCGGCCCG
GCGAAGGCCT GGGGCAACAT GGACTACGGC AAGAAGGATC CCAGCCTGGG CTGGCGCTAT
ACCGATGCCT GGATGTCCAT GGCCGGCATG GGCGACAAGG GCGAGCCGAA CGGGCTGCCG
GTCGACGAAT GGGGCGTCCG CGTCGACGAG AACTCGCGCC CCGTCGGCTC CTGCGTGGCG
CGCGGCGGTG CGACCAACGA TGCGGCGGCG GTCTATGCCG TGACCAAGGC CATCGACTGG
CTCAAGAACT ACACCCCGCC CGAGGCCATG GGCATGACCT TCGGCGAGGC GGGGCCGGTC
CCGGCGCGCG GCGACATCGC GCAGCAGATG TTCTGGTATA CTGCCTTCAC CGCCGATATG
GTCAAGCCCG GCACCCCGGT CATGAACGAG GACGGCACGC CGAAATGGCG CATGGCCCCC
AGCCCGCACG GCGCCTATTG GGCCGAGGGC ACCAAGATCG GCTATCAGGA CGTGGGTTCC
TGGACGCTGA TGAAGTCGAC CCCGGTGGAC CGCGCGCAGG CCGCCTGGCT TTACGCGCAG
TTCGTGACCT CGAAGACCGT GGACGTGAAG AAATCCCATG TCGGGCTGAC CTTCATCCGC
GAGTCGACGA TCCAGGACCA GTCCTTTACC GAACGCGCGC CGGAGCTTGG TGGTCTGGTC
GAGTTCTATC GCTCGCCCGC CCGCGTGCAA TGGTCGCCGA CCGGCACGAA CATCCCCGAC
TATCCCAAGC TCGCGCAGCT CTGGTGGCAG AACATCGGCG ACGCGCTTTC GGGCGCCAAG
ACCCCGCAGG AGGCGCTGGA TGCGCTTTGC GCCGAGCAGG AGCGGGTGCT GGCGCGGCTG
GAACGCTCGG GCGTGCAGGG CGACCTGGGG CCCAAGCTGA ACGAGGAAAA GGACCCGCAG
GAATGGCTGG ACGCCGAGGG CGCGCCCGTC GGACCGCTGG AGAACGAAAA GCCGCAGGGC
GAGACGATCT CCTATGACGA GTTGATCAAG TCCTGGCAGT GA
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| Protein sequence | MRPMQRTTAM ALALLVMEAP AWADMEAAKR FLDAEIGDLS SLSREDQEKE MQWFVDAAQP
LAGMEIKVVS ETITTHEYEA KVLAPAFTAI TGIKVTHDLI GEGDVVEKLQ TQMQTGENIY
DAYVNDSDLI GTHWRYQQAR SLTKWMEEEG KDFTSPTLDL GDFIGLEFTT APDGDLYQLP
DQQFANLYWF RYDWFSDAKT QEDFKAKYGY DLGVPVNWSA YEDIAEFFTG RDMSYIAGGP
AKAWGNMDYG KKDPSLGWRY TDAWMSMAGM GDKGEPNGLP VDEWGVRVDE NSRPVGSCVA
RGGATNDAAA VYAVTKAIDW LKNYTPPEAM GMTFGEAGPV PARGDIAQQM FWYTAFTADM
VKPGTPVMNE DGTPKWRMAP SPHGAYWAEG TKIGYQDVGS WTLMKSTPVD RAQAAWLYAQ
FVTSKTVDVK KSHVGLTFIR ESTIQDQSFT ERAPELGGLV EFYRSPARVQ WSPTGTNIPD
YPKLAQLWWQ NIGDALSGAK TPQEALDALC AEQERVLARL ERSGVQGDLG PKLNEEKDPQ
EWLDAEGAPV GPLENEKPQG ETISYDELIK SWQ
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