| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4382 |
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| Symbol | |
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| ID | 4582932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1575068 |
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| End bp | 1576975 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771689 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_918142 |
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| Protein GI | 119387087 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.429499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.246253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTCA GAACCCCGGC TTCCCTGCTG GCCGCCACCG CCCTGCTCCT GCCCGCCGCC
GCAACGGGGC AGGAAGGCCA GGCCCCCGTC ATGCTTGACC CGGTGGTCCT GTCGGGCGGG
CTGTCGCCCG TCGCCGAAAG CGCCTATGGC CGGGCCTACA GCATCCTGAC CGCCGAGGAT
TTGCGGCAGC GCGGCTTCGT CACCGTCCAG GACGCGCTGC GCGACCTGCC CGGGCTTGCC
GTGACCTCGA CCGGCGAGAC CCTGACCATG GTCCGCATCC GCGGGGGCGA AGCCAATCAT
GTGCTGGTGC TGATCGACGG GGTCGAGGCC AACTCTCCCG GCAACGGAGA CTATGTCTTC
AGCGGTCTTC TGACCGAGGA TGTCGAGCGC ATCGAGGTGC TGCGCGGCCC GCAATCGACC
ATCTACGGCG CCAATGCCGC CGCCGGGGTG ATCGCGATCA CCACCCGCCG CGCCTCTGTC
CCGGGGCTGA GCTATGGCGG CGGGATCGAG ATCGGCGGGC TGGGCACCCG CGCCGCCAGC
GCCCATCTCC GCGCCATGGG CGAGCGCGGC CAGATCAGCT TCTCGGCGGC GACACGCCGC
ACCGATGGCG AGGACGCCTC GCGCACGCCG GGCGGCGATA CCGAGTTCAA CAACCGCGAG
ACGCTGACCC TCGGTGGCTC CTACGACATC GCCGAGGCCG TGACCGCCGG CTTCACCCTG
CGCCGGACCT GGCAGGAATA CGGCTACGAC CGGGCGATCG ACCCGGTGGA TTCCCCCGAC
GACCATGTGA TCGACACACC GCACACCGCC GACCGCAACG AAACCTATGG CTCGCTCTGG
ATCGAGGCCG AGGCGCTGGG GGGCAGGCTG CTGAACCGCT TCGCCGTCTC GGGCTCCAAC
CAGGCCACGG ACCATTTCAA CGACGGCGTG CCGGATTACG ACGACGCCTC GCGGCTGCGG
GATTTCAGGT ATACCGGCAC ATGGGCGCTG GACGGCGGCA ATGCCCGCAA TTCCGCGCAA
AAGCTCAATT TCGCGGTGCA GAAGAAGCGC GAGATCTATG AGAGCTCCTA TGCACCGGGC
GGCCGGTATG AGCGCGACAC GAAATCGCTT GCGCTGGAAT ATCAGGGCCA GTTCGACAAC
GGGATCGGCA TCCAGGCCGG CCTGCGGCGC GATTTCAACG ACGATTTCCG CAACGCGACC
ACCTGGAACA TCGCTGGCGC ATGGCAATTG CCCGATCGCG ACCTGCGCCT GCGCGCGGCC
GCCGGCAAGG CCATCGTCAA TCCCACCATG TTCGAGCTTT ATGGCTATGC GCCGGGCAGC
TATAGCGGCA ACCCGGACCT GACGCCGGAA ACCAGCCGCA GCTATGAAAT CGGCGCCGAC
TGGAGTTTCG CAGCGGGACG GGCTGCGCTG GGGGCGACCC TGTTCACCAG CAAGGTCGAG
GACATGATCG TCGGGGCCGG CACCACCTCG CAAAACATCG CCGGCACCAG CACGCGCAAG
GGGTTCGAGG CCGATCTGCA CTATGAAGCC ACCGATTGGC TGCGGCTGGG CGCGACCTAT
ACCTATACCG ACGCCCGCAC GGAAGACGAC GATCCCATCC CGCGCCAGCC GCGCCACCAG
CTTGGGCTGC GCGCCACGGG CGATTTTGCC GGGGGTCGCG GCTCGGCCAC GGCCGATCTG
CGCTATGTCG CGGGCAATTA CGACGAGGAA TGGTTCAGAA GCTGGACCCC GCCCACCACC
GAACTGCCCG ATTTCGTGAC CGTGAACCTG GCCGCGCAAT ACGACCTGAC CGAAAACCTG
CGCCTGACCG GCCGCGTGGT GAACCTGTTC GACAGGGATT ATTCCGAGGC CTGGGGCTAT
TACGGCCAGG GCCGCACCTT CTATGCCGGC CTGACGGCGC AATGGTAG
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| Protein sequence | MLFRTPASLL AATALLLPAA ATGQEGQAPV MLDPVVLSGG LSPVAESAYG RAYSILTAED
LRQRGFVTVQ DALRDLPGLA VTSTGETLTM VRIRGGEANH VLVLIDGVEA NSPGNGDYVF
SGLLTEDVER IEVLRGPQST IYGANAAAGV IAITTRRASV PGLSYGGGIE IGGLGTRAAS
AHLRAMGERG QISFSAATRR TDGEDASRTP GGDTEFNNRE TLTLGGSYDI AEAVTAGFTL
RRTWQEYGYD RAIDPVDSPD DHVIDTPHTA DRNETYGSLW IEAEALGGRL LNRFAVSGSN
QATDHFNDGV PDYDDASRLR DFRYTGTWAL DGGNARNSAQ KLNFAVQKKR EIYESSYAPG
GRYERDTKSL ALEYQGQFDN GIGIQAGLRR DFNDDFRNAT TWNIAGAWQL PDRDLRLRAA
AGKAIVNPTM FELYGYAPGS YSGNPDLTPE TSRSYEIGAD WSFAAGRAAL GATLFTSKVE
DMIVGAGTTS QNIAGTSTRK GFEADLHYEA TDWLRLGATY TYTDARTEDD DPIPRQPRHQ
LGLRATGDFA GGRGSATADL RYVAGNYDEE WFRSWTPPTT ELPDFVTVNL AAQYDLTENL
RLTGRVVNLF DRDYSEAWGY YGQGRTFYAG LTAQW
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