| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4378 |
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| Symbol | nrdF |
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| ID | 4582928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 1569481 |
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| End bp | 1570470 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639771685 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_918138 |
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| Protein GI | 119387083 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.677637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.592545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGGGG TTCTTCGGAT GAAGGATCAT GCCATGCGGA CGCCCGTGCG CGCGATCAAC
TGGAACCGGC TGGAGGACGA GAAGGACCTG GAGGTCTGGA ACCGGCTGAC CGTCAATTTC
TGGCTGCCCG AAAAGGTGCC GCTGTCGAAC GACGTGCAAA GCTGGGCCAC GCTGCGCCCC
GAAGAGCGCG AGCTGACCAT CCGGGTCTTT ACCGGGCTGA CGCTCTTGGA CACCATCCAG
AACACCGTGG GCGCGCCCGC GATGATGCCC GATGCGCTGA CCCCGCATGA GGAGGCGGTC
TTGTCGAACA TCGCCTTCAT GGAGGCGGTG CATGCGCGCA GCTATTCCTC GATCTTCTCG
ACGCTGTGCC TGACGCCCGA GGTGGACGCG GCCTTTCGCT GGGCCGAGGA GAACCCGCAT
CTGCAACAGA AGGCGCGGCT GGTTCTGGAG GAATACAAGG CCGGCTCGGA TCCGCTGAAG
CGCAAGATCG CCAGCGTGTT CCTGGAAAGC TTCATGTTCT ATTCCGGCTT CTACCTGCCG
ATGTATTGGT CGAGCCGCGC CAAGCTGACC AATACCGCCG ACCTGATCCG CCTGATCATC
CGCGACGAGG CGGTGCATGG CTATTACATC GGCTACAAAT ACCAGCGCGG GCTGGAGCGG
CTGGGCGAGG CCGAGCGCGC GGCGCTGAAG GACTTTGCCT TTTCGCTGAT CTTCGATCTC
TACGACATCG AGGCGAAATA CACCGCCGAG CTATACGACG GCATCGGGCT GACCGAAGAC
GTGAAGTCCT TCCTGCATTA CAACGCCAAC AAGGCCCTGC AGAACCTGGG CTACGAGGCG
CTGTTCCCGC CGCAGGCCTG CGAGGTCAAC CCGGCGATCC TGGCCGCCCT GTCCCCCGAC
AGCGAGAACC ACGACTTCTT CAGCGGCTCG GGGTCGAGCT ATGTCATCGG CAAGGCGGTC
GCGACCGAGG ACGAGGACTG GGATTTCTAG
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| Protein sequence | MKGVLRMKDH AMRTPVRAIN WNRLEDEKDL EVWNRLTVNF WLPEKVPLSN DVQSWATLRP
EERELTIRVF TGLTLLDTIQ NTVGAPAMMP DALTPHEEAV LSNIAFMEAV HARSYSSIFS
TLCLTPEVDA AFRWAEENPH LQQKARLVLE EYKAGSDPLK RKIASVFLES FMFYSGFYLP
MYWSSRAKLT NTADLIRLII RDEAVHGYYI GYKYQRGLER LGEAERAALK DFAFSLIFDL
YDIEAKYTAE LYDGIGLTED VKSFLHYNAN KALQNLGYEA LFPPQACEVN PAILAALSPD
SENHDFFSGS GSSYVIGKAV ATEDEDWDF
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