Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4353 |
Symbol | |
ID | 4582903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1541127 |
End bp | 1543205 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771660 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_918113 |
Protein GI | 119387058 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAA TAGGCGTCGA TGTGGGCGGG ACGAACACCG ATCTCGTTCT CGAATGCGGC CAAGGGGTGT TCTATCACAA GGTTCCGACC ACGCTGAAGA ACCAGTCGAT CGGCGTGGTC GAGGGGGTCA GGGGCATTTG CCGCAAGGCG GGGATCGACC CTGCGGAGGT CGAGATGATC GTCCACGGCA CCACCACGGC AACGAATATC ACCATCGAGC ACAACGGCTC GGAATGCGGG ATGATCACCA CCCATGGCTT CCGCGACATC CTGCATATCG GCCGCCACAA GCGGCCCTGC AATTTCTCGC TGCATTTCGA CGTGCCCTGG CAGAGCCAGC CGCTGGTCAA GCGCCGCAAT CGCATCGCCG TGCGCGAACG CATCCTGCCG CCCACGGGCG AGATCGCCGA GCCGCTGGAC GAGCAGGCGG TGCGCGATGC CTGCGCGCTG TTTCGCAAGC GCGGCATCGG CTCGGTCGTG ATCGGCTTCA TGTTCGCCTT CCTGAACGAC GCGCATGAGC GCCGCGCCAA GGAGATCGTG CTGGAGGAGA TGCCCGACGC CTATGTCACG CTGTCCTCGG AAGTGGCGAA CGTGATGCGG GAATACGAGC GTTTCTCGAC CGCGGCGATG AACTCCTATG TCGGCCCCAA GACCGCCCGT TACCTGCGCG ACCTGGATGC CCGGCTGCGC GAGGCCGGCG TGACCTCCAA GCTGCGCATC ATGCAGTCGA ACGGCGGCGT CTCGACCGTG GACGCCTGTG CCCGGCGCCC CATCCGCATC CTGATGTCCG GCCCGGCGGG CGGGGTGATC GGCGGCGCGT CCGAGGGCGA GATGGCCGGC ACGCCCAACA TCATCACCGT CGATATCGGC GGCACCTCGG CCGATGTCTC GACCATTCCC GGCGGCGCGG TCAAGATCAT GAACCCGCGC GACACCTATG TCTCGGGCCA TCCGGTGCTG ACGCCGATGA TCGACCTGGT GACCATCGGC GCGGGCGGCG GCTCGGTCGC CCATATCGAC GAGGCGGGCG CCTTCCATGT CGGCCCGCGC TCGGCGGGGT CCGAGCCGGG GCCGGCCTGC TATGGCCGCG GCGGCACCGA ACCCACGGTG ACCGATGCCC AGATCGTGCT GGGCCGGCTG GATCCCGACA TGGCGCTGGG CGGGGATCTT AAGCTGGACC CGGCCCTGTC CTTCAAGGCG GTCGAGGAAA GGATCGCCAG GCCCCTGGGC ATGAGCGTCA AGGACGCGGC GCTGGGGATC ATCAGGATCG TCAACAACAA CATGGCTCTG GCGATCCGCT CGAACTCGGT CGCGCGTGGC ATCGACCCGC GCGAATTCTC GATCATGCCC TTCGGCGGCG CGGGCCCCTT GCATGGCGTG GCGCTGGCCG AGGCCATGTC GGCCCGCGAC GTGATCGTCC CGGTCGCGCC GGGGATCACC GCCGCCGTGG GCCTGCTCAA GACCGACCTG CAATACGAGC ATACCGAAGC GGTGATCGTC GAGCTGATGA AGGCCGGCCC GGCGGAGTTC CAGCGCATCA ACACCGCCGT TGCGAACCTG CGCGCCGCGG TGCAGGCGGA ACTGGACGGC GACGGCATCC CGCGCGCGCA GCAGGAGATC ACCGTGCTGG CCGAATGCCG CTATCACGGG CAGGGGTTCG AGCTGCGGGC GACCATGCCC GAGGGGCCGG TCGGCGCCGA GAACCGCCAT GTCATCACCG ACAGCTTCCA CGACCAGCAC CAGCAGGACT ACGGCTACAG CTATCGCGAT GCCGAGGTGG AGCTGATCAC CCTGCGCGCC ATCGGCTCGG CCTCGGTGCC GCGCATCGAG ATCCCGAAGA TCGCGCCCAC AGATGGTTCG AGCATCGACC GGGCGCTGAT GTTCGTGCGG CCGACGACCT TCGACGACGG GCGCACGCTG GAAACCCCGC GCTACGACCG CGGCCGGCTG ATGGCCGGCG ACCAGGTGCC CGGCCCGGCG ATCCTGCACC AGCACAATGC GACCACTCTG GTCCCGCCCG GCTATGTCGC CGAGACGCTG GACTACGGCA ACACCCGCAT CCGTCCCATC GGCGCCTGA
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Protein sequence | MARIGVDVGG TNTDLVLECG QGVFYHKVPT TLKNQSIGVV EGVRGICRKA GIDPAEVEMI VHGTTTATNI TIEHNGSECG MITTHGFRDI LHIGRHKRPC NFSLHFDVPW QSQPLVKRRN RIAVRERILP PTGEIAEPLD EQAVRDACAL FRKRGIGSVV IGFMFAFLND AHERRAKEIV LEEMPDAYVT LSSEVANVMR EYERFSTAAM NSYVGPKTAR YLRDLDARLR EAGVTSKLRI MQSNGGVSTV DACARRPIRI LMSGPAGGVI GGASEGEMAG TPNIITVDIG GTSADVSTIP GGAVKIMNPR DTYVSGHPVL TPMIDLVTIG AGGGSVAHID EAGAFHVGPR SAGSEPGPAC YGRGGTEPTV TDAQIVLGRL DPDMALGGDL KLDPALSFKA VEERIARPLG MSVKDAALGI IRIVNNNMAL AIRSNSVARG IDPREFSIMP FGGAGPLHGV ALAEAMSARD VIVPVAPGIT AAVGLLKTDL QYEHTEAVIV ELMKAGPAEF QRINTAVANL RAAVQAELDG DGIPRAQQEI TVLAECRYHG QGFELRATMP EGPVGAENRH VITDSFHDQH QQDYGYSYRD AEVELITLRA IGSASVPRIE IPKIAPTDGS SIDRALMFVR PTTFDDGRTL ETPRYDRGRL MAGDQVPGPA ILHQHNATTL VPPGYVAETL DYGNTRIRPI GA
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