Gene Pden_4343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4343 
Symbol 
ID4582893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1525966 
End bp1526805 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content66% 
IMG OID639771650 
Productsulfate ABC transporter, inner membrane subunit CysT 
Protein accessionYP_918103 
Protein GI119387048 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02139] sulfate ABC transporter, permease protein CysT 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.279119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGG CGTTTCGCTT GCAAAAATCC CCCATGCCGG GCTTTGGCCT CGGCATGGGC 
ATCACGCTGG CCATGCTGTC GTTGATCGTC ATCCTGCCGG TCGGTGCACT GCTGGCCCGC
GGCATCAGCT ACGGCCCCGA GGCGGTCTGG GCCACGATCA ATACGCCCAG GGTCTGGGCG
GCGCTGTATC TGTCCTTCCG GCTGGCCTTC CTGGCCGCGC TGTTCAACCT GGTCTTCGGC
ACGCTGCTGG CCTGGGTGCT GGCGCGCTAT GACTTTCCCG GCCGCAGGCT GGTCGATGCG
CTGGTCGACC TGCCCTTCGC TCTGCCGACG GCGGTGGCAG GCATCGCGCT GACCGCGCTT
TACGCGCCGA ACGGCATCTT CGGCGGCATC GCGCGGGATC TGGGCGGCAA GATCGCCTAT
ACCCAATGGG GCATCCTGAT CGCGCTGATC TTCGTCGGCC TGCCCTTCGT TACCCGCACC
GTGCAGCCGG TGATCGCCGA GATCGAGCAG GAGGTCGAGG AAGCCTCGGC CACGCTGGGC
GCCGGGCGGT TCCATACCCT GCGCCGGGTG ATCCTGCCCA TGCTGCTGCC GGCCGCCCTG
ACCGGCTTTG CGCTGTCGCT GGCGCGTGCG GTCGGCGAAT ACGGCTCGGT CATCTTCATC
GCCGGCAACC TGCCCATGAA GACCGAGATC GCGCCGCTCC TGATCGTCAT CAAGCTTGAA
GAGTTCGACT ATGACGGCGC GGCGGCCATC GGCATCGCCA TGCTGCTGAT TTCCTTCAGC
ATGCTCCTGG CGATCAACCT GATCCAGATC TGGAGCCGGC GGAGGATCGG ACATGTTTGA
 
Protein sequence
MALAFRLQKS PMPGFGLGMG ITLAMLSLIV ILPVGALLAR GISYGPEAVW ATINTPRVWA 
ALYLSFRLAF LAALFNLVFG TLLAWVLARY DFPGRRLVDA LVDLPFALPT AVAGIALTAL
YAPNGIFGGI ARDLGGKIAY TQWGILIALI FVGLPFVTRT VQPVIAEIEQ EVEEASATLG
AGRFHTLRRV ILPMLLPAAL TGFALSLARA VGEYGSVIFI AGNLPMKTEI APLLIVIKLE
EFDYDGAAAI GIAMLLISFS MLLAINLIQI WSRRRIGHV