| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4315 |
|---|
| Symbol | |
|---|
| ID | 4582865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1494569 |
|---|
| End bp | 1495957 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639771622 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_918075 |
|---|
| Protein GI | 119387020 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.236333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG TTTCGACACG GGGGCGGGCT CCGGTCCTGG ACTTCGAACA GGCGATGATG
ACCGGGCTGG CGCGGGATGG CGGGCTTTAC CTGCCCGAGG CGATCCCGAT GTTCTCGGCC
GATGAGATCG CCCGCTTCGA GGGCCTGCCC TATGAAGAGG TCGCGCGGCG CGTCATCAGC
CCCTTCGTCG GCGAAAGCTT CGACGATGCC GAGTTGCGCG ATGCCATCGC CCGGGCCTAT
CAGGGCTTCG ACCATATCGC CCGTGCGCCG CTGGTCCAGC TTGCGCCCGG CCATCACCTG
CTGGAGCTGT TCCACGGGCC CACGCTGGCC TTCAAGGACT TCGCCATGCA GCTGATCGGC
CAGCTGTTCC AGCTGGCGCT GGCGCGCTCG GGGCAGCGGG TCACGATCCT TGGCGCGACC
TCGGGCGATA CCGGCTCGGC CGCGATCGAG GCGTTCCGGG GCCTGTCCAA TGTCGACGTG
TTCATCATGT ATCCGCATGG CCGCGTCAGC GAGGTGCAGC GCCGGCAGAT GTCCACGCCT
GCCGACGCCA ACGTCCATGC GCTGGCGGTC GACGGCACCT TCGACGATTG CCAGGCGCGG
CTGAAGGATC TGTTCAACGA CCACGATTTC CGCGATGCGG TCGGGCTTGC GGGCGTCAAT
TCGATCAACT GGGCGCGGGT GCTGGCGCAG ATCGTCTATT ACTTCACCGC CGCCGTCAGC
CTTGGCGCGC CGCGGCGCGA GGTGGACTTC ACCGTGCCGA CCGGCAATTT CGGCGATATC
TTCGCCGGCT CCATCGCCAG GACGATGGGC CTGTCCATCG GCAAGCTGAT CGTGGCCACC
AACCAGAACG ACATCCTGCA CCGGGCGCTG ACCAGCGGCG AATACCGCGT CGGCACCGCC
CGTCCCTCGA TCAGCCCTTC GATGGACATC CAGGTCAGTT CGAACTTCGA ACGCGCGCTG
TGGCTGGCCT ATGACCATGA CGGCAATGCC GTGTCGCGGC TGATGGACGA GCTGAAATCC
GGCGGCTTCG CCATCAGCCA GGGCGCGTTG CAGCAGTTGC GCGAGACCTA TGTCTCGGGG
CGCGCCTCGG AGGCGGAGAC GACGGCGATG ATCGCCACCA TCCGCGAGGA GACGGGCGAG
GTGATCTGCC CGCATACCGC CGTCGCCGTG AAGGTGGCGC GCGAGCATAT GCGTCCCGGC
GTGCCGATGG TCAGCCTGTC GACCGCGCAT CCGGCGAAAT TCCCCGATGC GGTCGAGGCC
GCCATCGGCA TTCGCCCGCC TCTGCCGCCG CACATGGCCG ACCTGTTCCA GCGCGACGAA
CGCATCACCC GTATTGCAAA TGACGCCGAT GCCATTAAAT CGCTGATCCT TGAACGGAGA
ACAGTGTGA
|
|---|
| Protein sequence | MRYVSTRGRA PVLDFEQAMM TGLARDGGLY LPEAIPMFSA DEIARFEGLP YEEVARRVIS
PFVGESFDDA ELRDAIARAY QGFDHIARAP LVQLAPGHHL LELFHGPTLA FKDFAMQLIG
QLFQLALARS GQRVTILGAT SGDTGSAAIE AFRGLSNVDV FIMYPHGRVS EVQRRQMSTP
ADANVHALAV DGTFDDCQAR LKDLFNDHDF RDAVGLAGVN SINWARVLAQ IVYYFTAAVS
LGAPRREVDF TVPTGNFGDI FAGSIARTMG LSIGKLIVAT NQNDILHRAL TSGEYRVGTA
RPSISPSMDI QVSSNFERAL WLAYDHDGNA VSRLMDELKS GGFAISQGAL QQLRETYVSG
RASEAETTAM IATIREETGE VICPHTAVAV KVAREHMRPG VPMVSLSTAH PAKFPDAVEA
AIGIRPPLPP HMADLFQRDE RITRIANDAD AIKSLILERR TV
|
|---|
| |