Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4298 |
Symbol | |
ID | 4582848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1476404 |
End bp | 1477600 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771605 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_918058 |
Protein GI | 119387003 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.894409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAGG AGCCGAAGTC CCAGGAGTCG AACCAGCCTC TGCATCCGCG CACGCGTGCC GTCCATCACG GCATTCGCCG CAGCCAGTAT GGCGAGATGG CCGAGGCCCT GTTCATGACC CAGGGCTTTT CCTACGACAG CGCCGAACAG GCCGAGGCCC GTTTCCTCAA GACCGGCCCG GACGAGTTCA TCTATGCCCG CTACGGCAAC CCGACCTCGC GCATGTTCGA GGACCGCATC GCCGATCTGG AGGGGACCGA GGACGCCTTT GCCACCGCCA GCGGCATGGC GGCGGTCAAC GGCGCGCTGA TGTGCCTTGT CAAGCCGGGC GATCACATCG TCTCGTCGCG GGCGCTGTTC GGCTCCTGCC TCTACGTGCT TGACGTGCTG GCGCGCTTCG GGGTCGAGGT CACTTACGTC GACGGCACCG ACCTTGGACA ATGGCGCGCG GCGATCCGGC CGGATACCAG GGCCGTGTTC TTCGAGTCGG TGTCGAACCC GACGCTGGAG GTGGTAGACA TCGCCGGCGT GGCGGAGCTG GCCCACGCGG TCGGGGCGCT GGTCGTGGTG GACAACGTCT TTGCCACCCC GGTCTATTCC CGCGCGGTCG AACAGGGCGC CGACGTGGTG GTCTATTCCG CGACCAAGCA TATCGACGGT TCGGGCCGCT GCCTGGGCGG GGTGATCTGC GGTACGCGCC AGTTCGTGCG CGAGGTGGCC GAGCCCTATC TGAAACATAC CGGCGGCGCG ATCAGCCCCT TCAACGCCTG GATGATGCTG GGCGGGCTTG CGACGATGGA GCTACGCGTG CGCGCCCAGA CCGACAGCGC CCTGCAACTG GCGACCGCGC TGAAGGACGA GCCCAGGCTT GCCCGCGTCA TCTATCCCGG CCTGCCCGAC CATCCGCAGC ACGACCTGGT GCAGCGCCAG ATGGGCGCGG GCGGCACCAT GGTCGCCATC GACCTGGGCA GCAAGGAGGC GGCCTTCGCT GCGATGAACC GCATGCGCAT CTTCCAGATC TCGAACAACC TGGGCGATGC GAAATCCATC GTCACCCATC CCTCGACCAC GACGCATCAG CGCCTGTCCG AAGAGGTTCG GCTGGACCTC GGCATCACGC CGGGTCTTTT GCGCCTGTCC ATCGGGCTCG AGGATGCCGG CGACCTGATC GCGGACATCC GCCAGTCGCT GGCCTGA
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Protein sequence | MSQEPKSQES NQPLHPRTRA VHHGIRRSQY GEMAEALFMT QGFSYDSAEQ AEARFLKTGP DEFIYARYGN PTSRMFEDRI ADLEGTEDAF ATASGMAAVN GALMCLVKPG DHIVSSRALF GSCLYVLDVL ARFGVEVTYV DGTDLGQWRA AIRPDTRAVF FESVSNPTLE VVDIAGVAEL AHAVGALVVV DNVFATPVYS RAVEQGADVV VYSATKHIDG SGRCLGGVIC GTRQFVREVA EPYLKHTGGA ISPFNAWMML GGLATMELRV RAQTDSALQL ATALKDEPRL ARVIYPGLPD HPQHDLVQRQ MGAGGTMVAI DLGSKEAAFA AMNRMRIFQI SNNLGDAKSI VTHPSTTTHQ RLSEEVRLDL GITPGLLRLS IGLEDAGDLI ADIRQSLA
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