Gene Pden_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4249 
Symbol 
ID4582799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1415269 
End bp1416657 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content68% 
IMG OID639771556 
Productsodium:dicarboxylate symporter 
Protein accessionYP_918009 
Protein GI119386954 
COG category[R] General function prediction only 
COG ID[COG1823] Predicted Na+/dicarboxylate symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.688664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCG TTCTCATCAA CCTTCTGATC TTTGCCGCGC TGATTGTCGT GCTGGTCCGC 
CTCCAGGGCG GGCAGCTCTC GCTGTCGGTG CGGGTCTTCA TCGCCCTGAT CCTGGGCACG
CTGTTCGGGA TCGGGCTGCA ACTCGTCCAT GGCAACGGCT CGCCGGTGCT GCAGACCACG
ATCGACTGGA TCAACGTGGC CGGCAACGGC TATGTGCAGC TGCTGCAGAT GGTGGTGATG
CCGCTGGTCT TCGCGGCGAT CCTCAGCGCG GTGGCGCGGC TGCACGACGC TTCGGCGCTT
GGCCGGATCT CGGTGCTGAC GCTGGGCACG CTGCTCATCA CCACCGCCAT AGCGGCCTTC
GTGGGCGTGG TGATGTCGCT GGCCTTCGGC CTGACCGCCG AGGGACTGGC CCAGGGCGCG
GCCGAGACCG CCCGGCTGAC CACGCTGGAG ACCAGCTATG CCCCCCGGGT CGCCGACCTG
ACGGTGCCGC AGCTGCTCTT GTCCTTCATC CCGAAGAACC CCTTCGCCGA CCTGACCGGG
GCCAACCCGA CCTCGATCAT CGCGGTGGTG GTCTTTGCCG CCTTCCTGGG TGTCGCGGCC
ATCCGCCTGC TGCGCCGCGA TCCCGAAAAG GGCCGCAGCC TGCTGGGCCT GATCGACATC
CTGCAAGCCT GGATCAGCCA ACTGGTGCGG CTGATCATGG TGCTGACCCC CTATGGCGTC
ATGGCGCTGA TGACCAAGAT GGCGGCGACC TCGAACGCGG CCGACATCCT GAACCTGGGC
AAGTTCGTCG TCGCCTCCTA TCTGGGGCTG GCGATCATGT TCGTGGTCCA TGCCGTGCTG
CTGAGCCTGA CCGGGGTGAA CCCGCTGACC TTCTTCCGCA AGATCGTCCC GGCGCTGACC
TTCGCCTTCT CCAGCCGCTC CAGCGCCGCG ACCATCCCGC TCAATGTCGA GATCCAGACC
CGCCGGCTGG GCGTGCCGCA GACCATCGCC TCGTTCTCGG CCTCCTTCGG GGCGACCATC
GGCCAGAACG GCTGTGCCGG GCTCTATCCG GCGATGCTGG CGGTGATGGT GGCGCCGACG
GTCGGCATCA ACCCGCTGGA CCCGGCCTGG ATCATGACGC TCTTGGCCAT CGTCACGCTG
TCCTCGGCCG GGGTCGCGGG CGTGGGCGGG GGCGCGACCA TGGCGGCGCT GATCGTGCTG
CCGGCCATGG GCCTGCCGGT GACGCTGGTG GCGCTGCTGA TCTCGGTCGA GCCGCTGATC
GACATGGGCC GCACGGCGCT GAACGTCTCG GGCTCGATGA CGGCGGGCAC CGTCACCTCG
CAGATCCTCG GCCAGACCGA CAAGGCGGTC CTGCAAAGCC GCGAAGAGCG CAGCCTGCAA
AACGCCTGA
 
Protein sequence
MASVLINLLI FAALIVVLVR LQGGQLSLSV RVFIALILGT LFGIGLQLVH GNGSPVLQTT 
IDWINVAGNG YVQLLQMVVM PLVFAAILSA VARLHDASAL GRISVLTLGT LLITTAIAAF
VGVVMSLAFG LTAEGLAQGA AETARLTTLE TSYAPRVADL TVPQLLLSFI PKNPFADLTG
ANPTSIIAVV VFAAFLGVAA IRLLRRDPEK GRSLLGLIDI LQAWISQLVR LIMVLTPYGV
MALMTKMAAT SNAADILNLG KFVVASYLGL AIMFVVHAVL LSLTGVNPLT FFRKIVPALT
FAFSSRSSAA TIPLNVEIQT RRLGVPQTIA SFSASFGATI GQNGCAGLYP AMLAVMVAPT
VGINPLDPAW IMTLLAIVTL SSAGVAGVGG GATMAALIVL PAMGLPVTLV ALLISVEPLI
DMGRTALNVS GSMTAGTVTS QILGQTDKAV LQSREERSLQ NA