Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4249 |
Symbol | |
ID | 4582799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 1415269 |
End bp | 1416657 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771556 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_918009 |
Protein GI | 119386954 |
COG category | [R] General function prediction only |
COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.688664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCCG TTCTCATCAA CCTTCTGATC TTTGCCGCGC TGATTGTCGT GCTGGTCCGC CTCCAGGGCG GGCAGCTCTC GCTGTCGGTG CGGGTCTTCA TCGCCCTGAT CCTGGGCACG CTGTTCGGGA TCGGGCTGCA ACTCGTCCAT GGCAACGGCT CGCCGGTGCT GCAGACCACG ATCGACTGGA TCAACGTGGC CGGCAACGGC TATGTGCAGC TGCTGCAGAT GGTGGTGATG CCGCTGGTCT TCGCGGCGAT CCTCAGCGCG GTGGCGCGGC TGCACGACGC TTCGGCGCTT GGCCGGATCT CGGTGCTGAC GCTGGGCACG CTGCTCATCA CCACCGCCAT AGCGGCCTTC GTGGGCGTGG TGATGTCGCT GGCCTTCGGC CTGACCGCCG AGGGACTGGC CCAGGGCGCG GCCGAGACCG CCCGGCTGAC CACGCTGGAG ACCAGCTATG CCCCCCGGGT CGCCGACCTG ACGGTGCCGC AGCTGCTCTT GTCCTTCATC CCGAAGAACC CCTTCGCCGA CCTGACCGGG GCCAACCCGA CCTCGATCAT CGCGGTGGTG GTCTTTGCCG CCTTCCTGGG TGTCGCGGCC ATCCGCCTGC TGCGCCGCGA TCCCGAAAAG GGCCGCAGCC TGCTGGGCCT GATCGACATC CTGCAAGCCT GGATCAGCCA ACTGGTGCGG CTGATCATGG TGCTGACCCC CTATGGCGTC ATGGCGCTGA TGACCAAGAT GGCGGCGACC TCGAACGCGG CCGACATCCT GAACCTGGGC AAGTTCGTCG TCGCCTCCTA TCTGGGGCTG GCGATCATGT TCGTGGTCCA TGCCGTGCTG CTGAGCCTGA CCGGGGTGAA CCCGCTGACC TTCTTCCGCA AGATCGTCCC GGCGCTGACC TTCGCCTTCT CCAGCCGCTC CAGCGCCGCG ACCATCCCGC TCAATGTCGA GATCCAGACC CGCCGGCTGG GCGTGCCGCA GACCATCGCC TCGTTCTCGG CCTCCTTCGG GGCGACCATC GGCCAGAACG GCTGTGCCGG GCTCTATCCG GCGATGCTGG CGGTGATGGT GGCGCCGACG GTCGGCATCA ACCCGCTGGA CCCGGCCTGG ATCATGACGC TCTTGGCCAT CGTCACGCTG TCCTCGGCCG GGGTCGCGGG CGTGGGCGGG GGCGCGACCA TGGCGGCGCT GATCGTGCTG CCGGCCATGG GCCTGCCGGT GACGCTGGTG GCGCTGCTGA TCTCGGTCGA GCCGCTGATC GACATGGGCC GCACGGCGCT GAACGTCTCG GGCTCGATGA CGGCGGGCAC CGTCACCTCG CAGATCCTCG GCCAGACCGA CAAGGCGGTC CTGCAAAGCC GCGAAGAGCG CAGCCTGCAA AACGCCTGA
|
Protein sequence | MASVLINLLI FAALIVVLVR LQGGQLSLSV RVFIALILGT LFGIGLQLVH GNGSPVLQTT IDWINVAGNG YVQLLQMVVM PLVFAAILSA VARLHDASAL GRISVLTLGT LLITTAIAAF VGVVMSLAFG LTAEGLAQGA AETARLTTLE TSYAPRVADL TVPQLLLSFI PKNPFADLTG ANPTSIIAVV VFAAFLGVAA IRLLRRDPEK GRSLLGLIDI LQAWISQLVR LIMVLTPYGV MALMTKMAAT SNAADILNLG KFVVASYLGL AIMFVVHAVL LSLTGVNPLT FFRKIVPALT FAFSSRSSAA TIPLNVEIQT RRLGVPQTIA SFSASFGATI GQNGCAGLYP AMLAVMVAPT VGINPLDPAW IMTLLAIVTL SSAGVAGVGG GATMAALIVL PAMGLPVTLV ALLISVEPLI DMGRTALNVS GSMTAGTVTS QILGQTDKAV LQSREERSLQ NA
|
| |