| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4237 |
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| Symbol | |
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| ID | 4582787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1401051 |
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| End bp | 1403768 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639771544 |
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| Product | nitrite transporter |
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| Protein accession | YP_917997 |
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| Protein GI | 119386942 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.880598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.425469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACC CAAGTTCCTT TCCCCCGATG CAGCAGCAAA AGGCGCTGTG GCTCAGCACC
ACCGCCTTCA CGCTGTGCTT CGCCGTCTGG ACGATCTTTT CCATCATCGG CATCACCATC
AAGGAAGAGC TCGGCCTGAC CGAGTTCGAA TACGGTGTGC TGATCGCCAC GCCCATCCTG
ACCGGCTCGC TGGTGCGGCT GATCCTGGGT GTCTGGACCG AACGCTATGG CGGGCGGCTG
GTGTTTTCGC TGCAGATGCT GTTCACCGGC ATCGCCACCT GGGCGCTGAC CTGGGCCGAG
AGCTATGCCG GCTTCCTGCT GGCCGCGCTG GGCGTGGGCA TGGCGGGCGG CTCGTTCATC
ATCGGCGTCG CCTATGTCTC GAAATGGTTC CCGGCCCAGC GGCAGGGCAC CGCGCTCGGC
ATCTTCGGCA TGGGCAACGT GGGCGCGGCG GTGACCAAGT TCATCGCGCC CTTCATCCTG
GTCGCCTGGG GCTGGCAGGC CGTGGCGCAG ATCTGGGCGG TGGGCATCGC GCTGATGGGC
GTGGTCTTCC TGCTGGTCGC CCGCGACGAT CCCGATTTCG AGGCCCGCCG CGCCCAGGGC
ATCGCCGCGC CGACGCTGGC CGAGCAATTC GCGCCGCTGA AGAGGCTGCA GGTCTGGCGC
TTCGCGCTTT ACTATTTCTT CGTATTCGGC GGTTTCGTCG CCCTGGCGCT GTGGCTGCCG
CATTACCTGA CGCAGGTCTA TGGCGTCGAC CTGCGGGTCG CGGGCATGGC GGCGGCGGCC
TTCAGCCTGT CGGCCAGCAT CTTCCGCGCC TATGGCGGCG TGCTGTCGGA CCGTTTCGGC
GCGCGCACGG TGATGTATTG GACCTTCGGC TTCAGCGCCC TGTTCCTGTT CATGCTGTCC
TATCCGCCGA CCGACTATAC CATCCGCGGC AAGGACGGGC TGATCTCGTT CTCGACCGAG
ATGGGGCTCT GGCCCTTCGT GGTCACGCTG TTCGCGCTGG GCTTCTTCAT GAGCCTGGGC
AAGGCTGCGA TCTTCAAGCA TATCCCGGTC TATTACCCGA ACCATGTCGG GGCGGTCGGC
GGGCTTGTCG GCATGATCGG CGGCCTGGGC GGCTTCATCC TGCCCATCGT CTTTGGCGCG
CTTCTGGACC TGACCGGGAT CTGGACCTCC AGCTTTGCGC TGCTGTTCCT GGTGGTCGTC
GTCTCGATGG CCTGGATGCA TCTGTCGATC CGCGCCATGG AGCGCCGCGC GCAGGGCCGG
GCCCTGGACC GGCTGCCGAA CTTTCCCGAA CTGGCCGAGG TGCATGACCC CGAGCGCACG
GTGATGCCGC GCGTGCTGGA CGACTGGCGC CCCGAGAACC CGACCTTCTG GGCCGAGCAG
GGCCGCAAGA TCGCCAGGCG CAACCTGTGG ATCTCGATCC CCGCCCTGAC GCTGGCCTTC
GCGGTCTGGA TGGTCTGGTC GGTGGTGGTG GCCAAGCTGC CGCTGATCGG CTTCGACTTC
ACCCAGGACC AGCTGTTCTG GCTGGCGGCG CTGCCGGCGC TGTCCGGCGC CACGCTGCGC
ATCTTCTACA GCTTCATGGT GCCGATCTTT GGCGGGCGGC TGTGGACCAC GCTGTCCACC
GCCTCGCTGC TGATCCCGGC CATGGGCATC GGCTATGCGG TGCAGGATCC CTCGACGCCC
TATCTGATCT TCGTGGTGCT GGCGCTGCTT TGCGGGCTGG GCGGCGCGAA CTTCGCCTCG
TCCATGGCCA ATATCAGCTT CTTCTTCCCC AAGGCCGAAA AGGGCAACGC GCTGGGGCTG
AACGCGGGCC TGGGCAACCT GGGCGTATCG CTGATGCAGT TCCTGGTGCC CATCGTCATC
ACCGCCGGCG TTTTCGGCGC CATGGGCGGC GCCCCGCAAG AGCTTTCGGA CGGCGGGCGG
CTGTGGATGC AGAACGCGGG CTTCGTCTGG GTGCCCTTCA TCATCGCCTC GACCATCGCG
GCATGGCTGG GCATGAACGA CATCACCGAT GCCCGCGCCA GCTTCCGCGA GCAGGCGGTG
ATCTTCACCC GCAAGCACAA CTGGGTGATG TGCCTGCTCT ATATCGGCAC CTTCGGCAGC
TTCATCGGCT ATTCGGCGGG CTTTCCGCTG CTGACCGGCC TGGCCTTCCC GGACGTGAAC
GCGCTGCAAT TCGTCTTTCT CGGCCCGCTG GTCGGTGCGC TCAGCCGCGC AGGAACGGGC
TGGCTGTCCG ACCGGGTCGG CGGCGGGCGG GTGACCTTCT GGGTCTTTGC CGGCATGATC
GCCTCGGTGG GGCTGGTCAT CGTCTCGCTG CAGGCGCTGT CCTTCTGGGG CTTCTTCGCG
GGCTTCATGG CGCTGTTCTT CTTTACCGGG GTCGGCAATT CCTCGACCTT CCAGATGATC
CCGGTGATCA TGCGCAAGGA AGTCGCGCGG CTCGAGCCGC AGCTTTCGCC CGAGGATCGT
CGCCGCCAGT CCGACCGCGA ATCCGCCGCG ATCATCGCCT TCACCAGCGC GATCGGCGCC
TATGGCGGGT TCTTCATCCC CAAGGCTTAC GGCAGCTCGA TCGCCCTGAC CGGATCGGCG
CTTGGCGCGC TCTGGGCCTT CCTGGGCTTC TATGTGCTGT GCCTTGCCGT GACCTGGGTG
TTCTACACCC GTCCGGGCGG CCTTCTGCAC GACATCGAAC GCGGCCGCGC CCCTTCCGGC
GCCGCCACCC CCGCCTGA
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| Protein sequence | MPDPSSFPPM QQQKALWLST TAFTLCFAVW TIFSIIGITI KEELGLTEFE YGVLIATPIL
TGSLVRLILG VWTERYGGRL VFSLQMLFTG IATWALTWAE SYAGFLLAAL GVGMAGGSFI
IGVAYVSKWF PAQRQGTALG IFGMGNVGAA VTKFIAPFIL VAWGWQAVAQ IWAVGIALMG
VVFLLVARDD PDFEARRAQG IAAPTLAEQF APLKRLQVWR FALYYFFVFG GFVALALWLP
HYLTQVYGVD LRVAGMAAAA FSLSASIFRA YGGVLSDRFG ARTVMYWTFG FSALFLFMLS
YPPTDYTIRG KDGLISFSTE MGLWPFVVTL FALGFFMSLG KAAIFKHIPV YYPNHVGAVG
GLVGMIGGLG GFILPIVFGA LLDLTGIWTS SFALLFLVVV VSMAWMHLSI RAMERRAQGR
ALDRLPNFPE LAEVHDPERT VMPRVLDDWR PENPTFWAEQ GRKIARRNLW ISIPALTLAF
AVWMVWSVVV AKLPLIGFDF TQDQLFWLAA LPALSGATLR IFYSFMVPIF GGRLWTTLST
ASLLIPAMGI GYAVQDPSTP YLIFVVLALL CGLGGANFAS SMANISFFFP KAEKGNALGL
NAGLGNLGVS LMQFLVPIVI TAGVFGAMGG APQELSDGGR LWMQNAGFVW VPFIIASTIA
AWLGMNDITD ARASFREQAV IFTRKHNWVM CLLYIGTFGS FIGYSAGFPL LTGLAFPDVN
ALQFVFLGPL VGALSRAGTG WLSDRVGGGR VTFWVFAGMI ASVGLVIVSL QALSFWGFFA
GFMALFFFTG VGNSSTFQMI PVIMRKEVAR LEPQLSPEDR RRQSDRESAA IIAFTSAIGA
YGGFFIPKAY GSSIALTGSA LGALWAFLGF YVLCLAVTWV FYTRPGGLLH DIERGRAPSG
AATPA
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