| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4230 |
|---|
| Symbol | |
|---|
| ID | 4582780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 1391761 |
|---|
| End bp | 1392975 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639771537 |
|---|
| Product | NnrS family protein |
|---|
| Protein accession | YP_917990 |
|---|
| Protein GI | 119386935 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCT CGGAGCGCAT GCGCAACTAT CACGGGCCGG TGCTGCTGAG CCACGGCTTC
CGGGCCTTCT TCCTCATCTC GGCGCTTTGG GCCGCGCTGG CCATGGCGAT CTGGGTGGCC
ATGCTCGGCG GGGCCGAGAT CCTGCCCCTG GCCTTCGATC CGTTCAGCTG GCACGCGCAT
GAGTTCCTTT TCGGCTATCT GGGCGGGGTC ATCGCCGGCT TCCTGCTGAC CGCGGTGCCG
AACTGGACCG GGCGGCTGCC GGTGATGGGC ATGCCCCTGG CCGGGCTGGT CGGGCTGTGG
CTTCTGGGCC GGGTTGCCGT CGCCGTCTCG GCGCTGGTCG ACTGGCGGCT GGTCATGCTG
ATCGACCTGG CCTGGGTCCT GTCGCTGGCC GCCTTCCTGG CACGCGAGAT CCTGCGCGGC
CGGAACTGGC GCAACCTGCC GGTGCTGGCG CTGCTGGCGC TGTTCACCGC CGGCAACGCG
CTGTTCCACA TCGAGGCCGC CCGCGGCGAC CCGGCCTTTG AGGGCATGGG CATGCGGCTG
GGACTGGCCG CGGCGCTGAT CCTGATCGCG CTGATCGGCG GGCGGATCAT CCCCAGCTTT
ACCCGCAACT GGCTGGCGGC GCGGGGCGCG AAACACCTGC CTGCGCCCTT CGGCCGCGGC
GACGGGCTGG TGCTGGGCCT GACGGTCGTC ACCCTGGCGG GCTTCGTCGC CGTGCCCGAG
GCGCCGGCCA TGCCCTGGCT GATGCTGGCC TGCGGCGCGG CGCATCTGTG GCGGCTGGCG
CGCTGGCAAG GCTTGCGGAC CGGGGCCGAG CCGTTGCTTT GGGTGCTGCA CCTGGCCTAT
GCGCTGCTGG CATTGGGTTT CTGGGCCGAG GCGGCGGCGG GCCTGGACCT GATCGCGGCG
GCACCGGCGC GGCATGTCTG GCTGGCCGGC GCCATCGGCC TGATGACGCT GGCGGTGATG
AGCCGGGCGA GCCTTGGCCA TAGCGGCCGG GCGCTGCATG CCGGACCCGG CACCACGGCG
CTATATCTGG CGCTCATCGG CTCGGTGGTG CTGCGGCTGC TGGCCGGCTT GCTTCCGGCA
CAGGTCTGGC TGCTGCACCT GTCGGGCACG CTCTGGCTTC TGGCCTTCGG CGGCTTCGCG
CTGCTTTACC TGCCGGTGCT GGCCCGGCCG CGCGTCGCGA AAAAGCCGCT TTCGGGCGCA
AGGCACGCGG CCTGA
|
|---|
| Protein sequence | MSTSERMRNY HGPVLLSHGF RAFFLISALW AALAMAIWVA MLGGAEILPL AFDPFSWHAH
EFLFGYLGGV IAGFLLTAVP NWTGRLPVMG MPLAGLVGLW LLGRVAVAVS ALVDWRLVML
IDLAWVLSLA AFLAREILRG RNWRNLPVLA LLALFTAGNA LFHIEAARGD PAFEGMGMRL
GLAAALILIA LIGGRIIPSF TRNWLAARGA KHLPAPFGRG DGLVLGLTVV TLAGFVAVPE
APAMPWLMLA CGAAHLWRLA RWQGLRTGAE PLLWVLHLAY ALLALGFWAE AAAGLDLIAA
APARHVWLAG AIGLMTLAVM SRASLGHSGR ALHAGPGTTA LYLALIGSVV LRLLAGLLPA
QVWLLHLSGT LWLLAFGGFA LLYLPVLARP RVAKKPLSGA RHAA
|
|---|
| |