| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4201 |
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| Symbol | |
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| ID | 4582751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1360113 |
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| End bp | 1362173 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639771508 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_917961 |
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| Protein GI | 119386906 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.325691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCC ACTCGATCCG CGGCGCACTT CTGGCCGGAA CGGCCTGCCT GACCGCCTTG
ACCTTCACCG CCCCGCTGCT GGCGCAGGAA CGCGCCGGGG CCGATTCCGC ACAATCCACC
TATGTGCTCG ACCAGATCGT GCTGCGCGCC GGCAAGCCCA AGGTGGCGTC GGAAGTGCCG
CAATCGGTCT CGGTCGTGGA CAGCCGGCAG CTTGAGGACA TCGCGCCCAT CCATATCGGC
GAGGTGCTGG CCACGGTGCC CGGCGTCGCC GGCGTCGGCT CGGGCAGCTT CTTCGGGCAG
GGGTTCAACA TCCGCGGCTT CGGCTCCTCG GGTGCCGCGG CGTCAGAGTC CGGCATCGTC
CAGCTGATCG ACGGAGAAGA GAAATATTAC GAATCCTACC GCCAGGGTGC CTTGTTCGTG
GAACCTGACT TCCTGCGCCA GGTCGAGGTG TTGCGCGGTC CCGGCTCGTC CACGCTTTAC
GGTTCGGGCG CGCTTGGCGG CGTGATCGCC ATGGAGACGA TCGAGGCCGG CGACCTGATC
GCCGAGGGCC AGACCTTCGG CGGCCGGACC AAGCTCGGCT ATGCCAGCAA TCCCGACACG
GTGCTGGGCA GCGTCGCGCT TGGCTGGCGC CCGGCCGAGG ATTTCGAGGC GCTCGCCGCC
TTCGCCTGGC GCAAGCTGGG CGATACCAAG GATGCGGACG GCAATACCAC CGTGCGCGCG
AATTCCAAGA CGCCGAACCT GCTTCTGAAA GCCAAGAAGA CCTTCGGCGA CCAGTATGTC
GCCTTCTCCT ATCAGCATCT GGAGGCCAAG GGCGACGATC AGGACTTCAA CCAGCTCGAA
GGCGCGCAGG TCGGGCTGTT TCCCGGCTTT CCGGGTTGGG GGGTTGGCGA CATCACGACC
CGCGACCAGA CCGCGCGCTT CATCTGGGGC TGGAACCCCG AAGACAATCG CTACGTCGAC
CTGACCGCTA CCCTGTCCTA TACCAACACG CTCAAGGACG TGCGGCAGGG CGACGACCCG
GACGAGCCGA TCATGGATTC GCTGCTGGGA GAACGCGACT ACCGGCTGTG GAAATTCAAG
CTGAGCAACG TCGCAGACCT GTCGGGGGCG GGTTACGACC ACCACCTGAC CACCGGCGCC
GAGGTGCTGA AACAGGACCG CTCCTCCAGC GTTCCGTCGA GCTCGCATCC CGAGGCCTAT
ACCCGCGCCT GGGCCGCCTA TGCGTTGTCC GAATTGACCT GGGGCGACCT GACGATCAAC
TCCGGCCTGC GATACGAAAA GCAGCGCACC GAGCCGAAAT CCTCGGTCAC GGTGACGGAT
GACACCTACG ACGCGGATTC GGTCGAACCG CAGGTCGCCG CCATCTACCG CCTGAACGAC
AGCCTGTCGG TCTTTGGCTC AGTGGCTTTC GTGAACCGCA TGCCGACGGT GGACGAACTT
TACGACAGCT TCATGGGAGG CGCGCCTTCG GGTGACCTGA AGGACGAGAA GGGCAAGAAC
ATCGAGCTGG GCCTGTCCTA TCACGGCAGC GGCATCCTGA CCGCGAGCGA CGAGGCGGTG
GTGAAGCTCA CGCTGTTCCG AAACCATATC GACGACATGA TCGTGCGCAC CAATGCGCCC
GCGCCGATGC CGGCCTATGT CAATATCGAC CGCGCCTATC TGCGCGGCGG CGAACTCGAG
GCGACCTATT CCGTCGCCGC ATGGGAGTTC GGAGCGGCCT TCTCGGTCGT AAATGGGGTG
GATCAGGACG GTGCCGACCT GGACACGCTG CCCAACAACC GCGTGACCCT GCAGGCGATC
TGGCAAGCCA GCGACGCTTT GCGCCTTGGC CTGCGCAGCA CGCTGGCCGA TGGCCGCGAC
AAGCCTAACG GCACGCATCG CGCCGGCTAC GGCGTGCATG ACGTCTTTGC CACCTGGGTG
CCGCAGGGCG GTGCGGCGGC GGGGATCGAG GTCCATGTCG GCGTCGACAA TGTCACCGAC
CGCGACTACA CGCCCGCAAC CTGGCTCAGC GGTCCGGCGC CGGGGCGGAA CTTCAAGCTG
TCGGTCTCTC GCAGCTTCTG A
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| Protein sequence | MPRHSIRGAL LAGTACLTAL TFTAPLLAQE RAGADSAQST YVLDQIVLRA GKPKVASEVP
QSVSVVDSRQ LEDIAPIHIG EVLATVPGVA GVGSGSFFGQ GFNIRGFGSS GAAASESGIV
QLIDGEEKYY ESYRQGALFV EPDFLRQVEV LRGPGSSTLY GSGALGGVIA METIEAGDLI
AEGQTFGGRT KLGYASNPDT VLGSVALGWR PAEDFEALAA FAWRKLGDTK DADGNTTVRA
NSKTPNLLLK AKKTFGDQYV AFSYQHLEAK GDDQDFNQLE GAQVGLFPGF PGWGVGDITT
RDQTARFIWG WNPEDNRYVD LTATLSYTNT LKDVRQGDDP DEPIMDSLLG ERDYRLWKFK
LSNVADLSGA GYDHHLTTGA EVLKQDRSSS VPSSSHPEAY TRAWAAYALS ELTWGDLTIN
SGLRYEKQRT EPKSSVTVTD DTYDADSVEP QVAAIYRLND SLSVFGSVAF VNRMPTVDEL
YDSFMGGAPS GDLKDEKGKN IELGLSYHGS GILTASDEAV VKLTLFRNHI DDMIVRTNAP
APMPAYVNID RAYLRGGELE ATYSVAAWEF GAAFSVVNGV DQDGADLDTL PNNRVTLQAI
WQASDALRLG LRSTLADGRD KPNGTHRAGY GVHDVFATWV PQGGAAAGIE VHVGVDNVTD
RDYTPATWLS GPAPGRNFKL SVSRSF
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