Gene Pden_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4185 
Symbol 
ID4582735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1340694 
End bp1341395 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID639771492 
ProductexsB protein 
Protein accessionYP_917945 
Protein GI119386890 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00303394 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.206688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGA TAGTTGTCTG CTCGGGCGGA CTCGATTCCG TTTCGCTGGC GCATATGGTC 
GCCGCGCAAG GCGGGCTGAC GCGCCTGATC TCCTTCGACT ACGGCCAGCG CCACCGCAAG
GAGCTGGATT ACGCCGCCCT TGCCGCCCGG CGGCTGGGCG TGCCGCATCA CGTCATCGAC
ATGCGCGGTG TGGGGGCGGT GCTGACCGGC TCGGCCCTGA CCGGCGGGGC CGAGGTGCCG
GACGGGCATT ATGCCGAGGA GACCATGCGC ATCACCGTGG TCCCGAACCG CAACGCCATC
ATGCTGACCG TCGCCTTCGG CATGGCGGCG GCGATGGGCG ATCAGGCGGT GGCGACCGCC
GTGCATGGCG GCGACCATTT CATCTATCCC GACTGCCGCC CCGCCTTTAC CCAGGCGTTC
CAGCAGATGC AGGACGCCGC GCTGGACGGC TATGCGCAGG CGCGGCTGCT GACGCCCTTC
GTGCATCGCA CCAAAGCCGA CATCGTGACC GAGGGCGCCC GCCACGACAC GCCCTTTGCC
GAGACCTGGT CCTGCTACAA GGGTGGAGCG CTTCACTGCG GGCGCTGCGG CACCTGCGTC
GAGCGGCGCG AGGCGTTCCA CCTGGCCGGC ATCCCCGACC CGACCGCCTA TGAGGACGCG
GATTTCTGGC GGCAGGCCAT CGCGGAACGG GAGCGGGCCT GA
 
Protein sequence
MKTIVVCSGG LDSVSLAHMV AAQGGLTRLI SFDYGQRHRK ELDYAALAAR RLGVPHHVID 
MRGVGAVLTG SALTGGAEVP DGHYAEETMR ITVVPNRNAI MLTVAFGMAA AMGDQAVATA
VHGGDHFIYP DCRPAFTQAF QQMQDAALDG YAQARLLTPF VHRTKADIVT EGARHDTPFA
ETWSCYKGGA LHCGRCGTCV ERREAFHLAG IPDPTAYEDA DFWRQAIAER ERA