Gene Pden_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4182 
Symbol 
ID4582732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1339157 
End bp1339621 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID639771489 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_917942 
Protein GI119386887 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104861 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.570077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CGATCTATAG CGGCCTCAAG CAACTGGGCG GCGCCACCCT GCTGCCCGAA 
AGCCCCGACA AGGCCGAGCT GGAGCGGGTG CGGAACCCGC AGGCCGACGT GGCCTACAAC
GTGCGCTTCA CCGCGCCCGA GTTCACCTCG CTTTGCCCGA TGACCGGGCA GCCGGATTTC
GCGCACCTGG TGATCGACTA TGTGCCGGGC GAATGGCTGG TCGAATCGAA GTCGCTGAAG
CTTTACCTTG GAAGCTTTCG GAATCACGGT GCTTTTCACG AGGACTGCAC CGTCTCGATC
GGTCGGCGGC TGGCAGGGTT CCTTGCGCCG CGCTGGCTGC GCATCGGCGG CTATTGGTAT
CCGCGCGGCG GCATGCCCAT CGACGTGTTC TGGCAGACCG GCCCCATGCC CGAGGGGGTC
TGGATCCCCG ATCAGGACGT GCCGCCCTAT CGCGGCCGCG GCTGA
 
Protein sequence
MTETIYSGLK QLGGATLLPE SPDKAELERV RNPQADVAYN VRFTAPEFTS LCPMTGQPDF 
AHLVIDYVPG EWLVESKSLK LYLGSFRNHG AFHEDCTVSI GRRLAGFLAP RWLRIGGYWY
PRGGMPIDVF WQTGPMPEGV WIPDQDVPPY RGRG