Gene Pden_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4165 
Symbol 
ID4582715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp1321888 
End bp1322436 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content66% 
IMG OID639771472 
Product(Acyl-carrier-protein) phosphodiesterase 
Protein accessionYP_917925 
Protein GI119386870 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.575479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.537439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCC TGCATATCGA CAGCAGCATC ACCGGCGAGA ACAGCGTCAG CCGCATCGTC 
AGCCAGGCGA TCATCGACCG GCTGGCCGAG GCGCAGCCCG GCATCCCCGT CATTCGCCGC
GATCTTGCCA GCGCGCCGCT GCCGCACCTG ACGCTGGATG CGCTTGGCGA CACTTCGGTG
CTGGACGAGT TCCTGGCCGC CGATACGGTG GTGATCGGCG CGCCGATGTA TAACTTCACC
CTGCCCAGCC AGCTCAAGGC ATGGATCGAC CGCATCGTCG TTGCCGGCAA GACCTTCCGC
TATACCGCCG AAGGGCCGGA GGGGCTGGCC AAGGGCAAGC GCGTGATCGT CGCCCTGGCG
CGCGGCGGTT TTTACAGCGA CGAGGCCAGG ATCGCGCTGG AGCATCTGGA AAGCTATCTG
CGCTCGGTCT TTGCCTTCAT CGGCATCGAG GCCGAATTCG TGATGGCCGA TGGCGTGAGC
ATCGGTCCCG AACAGCGCCA GGCCGCCATC GACCAGGCGC TTGGCCAGAC CCGGCAGCTT
GCCGCCTGA
 
Protein sequence
MTILHIDSSI TGENSVSRIV SQAIIDRLAE AQPGIPVIRR DLASAPLPHL TLDALGDTSV 
LDEFLAADTV VIGAPMYNFT LPSQLKAWID RIVVAGKTFR YTAEGPEGLA KGKRVIVALA
RGGFYSDEAR IALEHLESYL RSVFAFIGIE AEFVMADGVS IGPEQRQAAI DQALGQTRQL
AA